RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 DMAP1Q9NPF5 467 aaPredicted RBP20.52■□□□□ 0.88
CHMP2B-204ENST00000472024 MRPL17Q9NRX2 175 aaKnown RBP20.52■□□□□ 0.88
CHMP2B-204ENST00000472024 TRMT1Q9NXH9 659 aaKnown RBP20.52■□□□□ 0.88
CHMP2B-204ENST00000472024 UVRAGQ9P2Y5 699 aa20.52■□□□□ 0.88
CHMP2B-204ENST00000472024 PCDHB5Q9Y5E4 795 aa20.52■□□□□ 0.88
CHMP2B-204ENST00000472024 CDY1Q9Y6F8 540 aa20.52■□□□□ 0.88
CHMP2B-204ENST00000472024 PATJQ8NI35 1801 aa20.52■□□□□ 0.88
CHMP2B-204ENST00000472024 MTMR11A4FU01 709 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 TULP2O00295 520 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 ADAM12O43184 909 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 AP1G2O75843 785 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 OR4Q2P0C623 313 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 CACNA2D1P54289 1103 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 ZNF268Q14587 947 aaPredicted RBP20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 ARHGAP29Q52LW3 1261 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 PPP1R15BQ5SWA1 713 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 PIGZQ86VD9 579 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 C3orf20Q8ND61 904 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 IPO4Q8TEX9 1081 aaKnown RBP20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 ZNF653Q96CK0 615 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 C18orf8Q96DM3 657 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 MCRS1Q96EZ8 462 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 C11orf70Q9BRQ4 267 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 MED10Q9BTT4 135 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 MYO1AQ9UBC5 1043 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 AFF4Q9UHB7 1163 aaKnown RBP20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 SALL4Q9UJQ4 1053 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 TFR2Q9UP52 801 aa20.51■□□□□ 0.87
CHMP2B-204ENST00000472024 RANBP2P49792 3224 aaKnown RBP20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 WDR27A2RRH5 827 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 BEST1O76090 585 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 ABL1P00519 1130 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 ERBB2P04626 1255 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 RRM1P23921 792 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 NDUFV1P49821 464 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 LIN9Q5TKA1 542 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 XYLT1Q86Y38 959 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 ZNF461Q8TAF7 563 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 NGRNQ9NPE2 291 aaKnown RBP20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 CNOT8Q9UFF9 292 aaKnown RBP20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 SCINQ9Y6U3 715 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 DUSP10Q9Y6W6 482 aa20.5■□□□□ 0.87
CHMP2B-204ENST00000472024 COL4A4P53420 1690 aaPredicted RBP20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 H3BNC9 293 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 TUBB4AP04350 444 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 CPB1P15086 417 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 ABCB4P21439 1286 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 BDNFP23560 247 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 OR1D2P34982 312 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 PBX2P40425 430 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 SMAD3P84022 425 aaKnown RBP20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 PDE12Q6L8Q7 609 aaKnown RBP20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 ARCQ7LC44 396 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 TRIM10Q9UDY6 481 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 MSRAQ9UJ68 235 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 PCDHGC5Q9Y5F6 944 aa20.49■□□□□ 0.87
CHMP2B-204ENST00000472024 E5RJQ4 531 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 TNFRSF10BO14763 440 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 TRIM66O15016 1216 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 HAPLN1P10915 354 aaPredicted RBP20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 DNAJB1P25685 340 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 MAP3K7CLP57077 242 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 MAMLD1Q13495 774 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 CAMK1Q14012 370 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 OLFML1Q6UWY5 402 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 RNF19BQ6ZMZ0 732 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 SPRED2Q7Z698 418 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 SLC35G2Q8TBE7 412 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 UBE2Q2Q8WVN8 375 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 POF1BQ8WVV4 589 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 SPATA17Q96L03 361 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 LMAN2LQ9H0V9 348 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 MRPL47Q9HD33 250 aaKnown RBP20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 LZTFL1Q9NQ48 299 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 TLR9Q9NR96 1032 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 PARVAQ9NVD7 372 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 IL37Q9NZH6 218 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 TJP2Q9UDY2 1190 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 LCMT1Q9UIC8 334 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 COG5Q9UP83 839 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 USP3Q9Y6I4 520 aa20.48■□□□□ 0.87
CHMP2B-204ENST00000472024 CHD9Q3L8U1 2897 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 A0A1W2PPC1 479 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 SIGLEC16A6NMB1 481 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 TEX28O15482 410 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 PAPSS1O43252 624 aaPredicted RBP20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 FBXO21O94952 628 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 ATF2P15336 505 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 RPL17P18621 184 aaKnown RBP20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 CYP2F1P24903 491 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 ERVFC1P60507 584 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 ADCY1Q08828 1119 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 SMC1AQ14683 1233 aaKnown RBP20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 IFI16Q16666 785 aaKnown RBP20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 MRPL43Q8N983 215 aaKnown RBP20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 ATAD1Q8NBU5 361 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 KCNK16Q96T55 309 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 RHOBTB2Q9BYZ6 727 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 CRISPLD1Q9H336 500 aa20.47■□□□□ 0.87
CHMP2B-204ENST00000472024 CNGB3Q9NQW8 809 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms