RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 EMC10Q5UCC4 262 aa20.41■□□□□ 0.86
SORT1-203ENST00000471996 PDCL2Q8N4E4 241 aa20.41■□□□□ 0.86
SORT1-203ENST00000471996 OR2I1PQ8NGU4 316 aa20.41■□□□□ 0.86
SORT1-203ENST00000471996 HNRNPLLQ8WVV9 542 aaKnown RBP20.41■□□□□ 0.86
SORT1-203ENST00000471996 CAMK1GQ96NX5 476 aa20.41■□□□□ 0.86
SORT1-203ENST00000471996 PKMYT1Q99640 499 aa20.41■□□□□ 0.86
SORT1-203ENST00000471996 TCRBV21S2A2A0A5A6 115 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 K7ENM7 598 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 LEFTY2O00292 366 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 SH3BP5O60239 455 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 APODP05090 189 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 SCN1AP35498 2009 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 EIF2DP41214 584 aaKnown RBP20.4■□□□□ 0.86
SORT1-203ENST00000471996 RPL6Q02878 288 aaKnown RBP20.4■□□□□ 0.86
SORT1-203ENST00000471996 SLC14A1Q13336 389 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 DHCR24Q15392 516 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 CFAP221Q4G0U5 840 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 INTS6LQ5JSJ4 861 aaKnown RBP20.4■□□□□ 0.86
SORT1-203ENST00000471996 IGSF10Q6WRI0 2623 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 SLC36A4Q6YBV0 504 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 FILIP1Q7Z7B0 1213 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 DEFB119Q8N690 84 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 KIAA1958Q8N8K9 716 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 ZNF560Q96MR9 790 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 PLIN2Q99541 437 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 DDX43Q9NXZ2 648 aaKnown RBP20.4■□□□□ 0.86
SORT1-203ENST00000471996 GTF3C4Q9UKN8 822 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 ODF2LQ9ULJ1 636 aa20.4■□□□□ 0.86
SORT1-203ENST00000471996 ANK1P16157 1881 aa20.39■□□□□ 0.86
SORT1-203ENST00000471996 EIF4E1BA6NMX2 242 aaKnown RBP20.39■□□□□ 0.85
SORT1-203ENST00000471996 SYPP08247 313 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 FTH1P19P0C7X4 201 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 PFKLP17858 780 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 ACAT1P24752 427 aaKnown RBP20.39■□□□□ 0.85
SORT1-203ENST00000471996 PNPLA4P41247 253 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 ZNF33AQ06730 810 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 PNPLA1Q8N8W4 532 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 MDM1Q8TC05 714 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 ZDHHC4Q9NPG8 344 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 L1RE1Q9UN81 338 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 PCDHB9Q9Y5E1 797 aa20.39■□□□□ 0.85
SORT1-203ENST00000471996 GON4LQ3T8J9 2241 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 ANKRD63C9JTQ0 380 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 GJB3O75712 270 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 GRIA2P42262 883 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 TNFRSF4P43489 277 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 ATP2C1P98194 919 aaPredicted RBP20.38■□□□□ 0.85
SORT1-203ENST00000471996 MYL7Q01449 175 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 POU5F1Q01860 360 aaKnown RBP20.38■□□□□ 0.85
SORT1-203ENST00000471996 ADALQ6DHV7 355 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 C12orf40Q86WS4 652 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 SPATA2LQ8IUW3 424 aaPredicted RBP20.38■□□□□ 0.85
SORT1-203ENST00000471996 SCN4BQ8IWT1 228 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 MYCT1Q8N699 235 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 FUBP3Q96I24 572 aaKnown RBP eCLIP20.38■□□□□ 0.85
SORT1-203ENST00000471996 REEP2Q9BRK0 252 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 SCUBE2Q9NQ36 999 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 ARHGEF4Q9NR80 690 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 RAXQ9Y2V3 346 aa20.38■□□□□ 0.85
SORT1-203ENST00000471996 SLC9A3R1O14745 358 aaPredicted RBP20.37■□□□□ 0.85
SORT1-203ENST00000471996 HUS1O60921 280 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 RESTQ13127 1097 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 CCDC142Q17RM4 750 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 RHBDF2Q6PJF5 856 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 NT5DC4Q86YG4 428 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 TMEM86AQ8N2M4 240 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 LRIG1Q96JA1 1093 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 AGO2Q9UKV8 859 aaKnown RBP20.37■□□□□ 0.85
SORT1-203ENST00000471996 PCDH15Q96QU1 1955 aa20.37■□□□□ 0.85
SORT1-203ENST00000471996 PI4KAP42356 2102 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 A0A1W2PQD8 194 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 TRAK2O60296 914 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 MAGEA11P43364 429 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 ZNF131P52739 623 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 SLC7A9P82251 487 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 GTF2BQ00403 316 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 SLFN12LQ6IEE8 588 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 NAXDQ8IW45 347 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 CDK5RAP3Q96JB5 506 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 PARVGQ9HBI0 331 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 TRPM5Q9NZQ8 1165 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 STYXL1Q9Y6J8 313 aa20.36■□□□□ 0.85
SORT1-203ENST00000471996 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.35■□□□□ 0.85
SORT1-203ENST00000471996 TISP43B9A030 160 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 FAM13AO94988 1023 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 ADH1CP00326 375 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 GABRG2P18507 467 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 POLR2BP30876 1174 aaKnown RBP20.35■□□□□ 0.85
SORT1-203ENST00000471996 ABCD1P33897 745 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 NEK4P51957 841 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 KDSRQ06136 332 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 TMEM119Q4V9L6 283 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 CRELD2Q6UXH1 353 aaPredicted RBP20.35■□□□□ 0.85
SORT1-203ENST00000471996 OSTM1Q86WC4 334 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 SLC41A1Q8IVJ1 513 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 GLIS3Q8NEA6 775 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 KCNV2Q8TDN2 545 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 SPATA17Q96L03 361 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 FIZ1Q96SL8 496 aa20.35■□□□□ 0.85
SORT1-203ENST00000471996 LLPHQ9BRT6 129 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms