RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ADORA2AP29274 412 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 L1TD1Q5T7N2 865 aaKnown RBP5.86□□□□□ -1.47
CD46-213ENST00000471987 MIS18BP1Q6P0N0 1132 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 ZNF783Q6ZMS7 281 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 CAND1Q86VP6 1230 aaKnown RBP5.86□□□□□ -1.47
CD46-213ENST00000471987 CNGA4Q8IV77 575 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 IZUMO1Q8IYV9 350 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 ABRAQ8N0Z2 381 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 ZBTB9Q96C00 473 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 LENG8Q96PV6 779 aaPredicted RBP5.86□□□□□ -1.47
CD46-213ENST00000471987 TRIM54Q9BYV2 358 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 NMRK2Q9NPI5 230 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 TYW1Q9NV66 732 aaKnown RBP5.86□□□□□ -1.47
CD46-213ENST00000471987 ZSCAN32Q9NX65 697 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 TUBA8Q9NY65 449 aaPredicted RBP5.86□□□□□ -1.47
CD46-213ENST00000471987 TFCP2L1Q9NZI6 479 aa5.86□□□□□ -1.47
CD46-213ENST00000471987 WDR17Q8IZU2 1322 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 E2F8A0AVK6 867 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 HSPA6P17066 643 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 KCNA3P22001 575 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 ARHGAP25P42331 645 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 ARFIP2P53365 341 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 PRKAG1P54619 331 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 DAZAP2Q15038 168 aaPredicted RBP5.85□□□□□ -1.47
CD46-213ENST00000471987 TRIP6Q15654 476 aaKnown RBP5.85□□□□□ -1.47
CD46-213ENST00000471987 ZIK1Q3SY52 487 aaPredicted RBP5.85□□□□□ -1.47
CD46-213ENST00000471987 SERPINA13PQ6UXR4 307 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 OR6B3Q8NGW1 331 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 RSPRY1Q96DX4 576 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 AIFM3Q96NN9 605 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 RHOBTB2Q9BYZ6 727 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 CIPCQ9C0C6 399 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 VPS16Q9H269 839 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 PDGFCQ9NRA1 345 aa5.85□□□□□ -1.47
CD46-213ENST00000471987 A0A1W2PPL8 197 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 BTN3A1O00481 513 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 ALDH1L1O75891 902 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 UBXN7O94888 489 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 MYCLP12524 364 aaPredicted RBP5.84□□□□□ -1.47
CD46-213ENST00000471987 NPR1P16066 1061 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 PLCD1P51178 756 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 RENBPP51606 427 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 PIN1Q13526 163 aaPredicted RBP5.84□□□□□ -1.47
CD46-213ENST00000471987 CYP1B1Q16678 543 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 PLA1AQ53H76 456 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 GPATCH3Q96I76 525 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 ANLNQ9NQW6 1124 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 ELOVL5Q9NYP7 299 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 GABBR1Q9UBS5 961 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 SNX14Q9Y5W7 946 aa5.84□□□□□ -1.47
CD46-213ENST00000471987 AP4M1O00189 453 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 IKBKBO14920 756 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 CYP2A6P11509 494 aaPredicted RBP5.83□□□□□ -1.48
CD46-213ENST00000471987 CCT4P50991 539 aaKnown RBP5.83□□□□□ -1.48
CD46-213ENST00000471987 E2F1Q01094 437 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 CTBP1Q13363 440 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 TTF1Q15361 905 aaPredicted RBP5.83□□□□□ -1.48
CD46-213ENST00000471987 LY6KQ17RY6 165 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 PXDC1Q5TGL8 231 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 SIRT6Q8N6T7 355 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 PRSS3P2Q8NHM4 247 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 BPIFB1Q8TDL5 484 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 FYTTD1Q96QD9 318 aaKnown RBP5.83□□□□□ -1.48
CD46-213ENST00000471987 TMEM79Q9BSE2 394 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 MS4A7Q9GZW8 240 aaPredicted RBP5.83□□□□□ -1.48
CD46-213ENST00000471987 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.83□□□□□ -1.48
CD46-213ENST00000471987 ZNF180Q9UJW8 692 aa5.83□□□□□ -1.48
CD46-213ENST00000471987 PSMD9O00233 223 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 TBC1D4O60343 1298 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 BCAR3O75815 825 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 FPR3P25089 353 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 RAB32Q13637 225 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 LAMB3Q13751 1172 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 CERCAMQ5T4B2 595 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 SFTPA1Q8IWL2 248 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 MPP5Q8N3R9 675 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 SLC35G2Q8TBE7 412 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 JPH3Q8WXH2 748 aaPredicted RBP5.82□□□□□ -1.48
CD46-213ENST00000471987 PPP2R3CQ969Q6 453 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 HMCESQ96FZ2 354 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 CAMKK2Q96RR4 588 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 PRR25Q96S07 402 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 FAM118BQ9BPY3 351 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 DPH1Q9BZG8 443 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 SPRTNQ9H040 489 aaPredicted RBP5.82□□□□□ -1.48
CD46-213ENST00000471987 AMFRQ9UKV5 643 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 PAXBP1Q9Y5B6 917 aa5.82□□□□□ -1.48
CD46-213ENST00000471987 PHGDHO43175 533 aaKnown RBP5.81□□□□□ -1.48
CD46-213ENST00000471987 KCNAB3O43448 404 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 VNN1O95497 513 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 ALDH5A1P51649 535 aaPredicted RBP5.81□□□□□ -1.48
CD46-213ENST00000471987 ANAPC15P60006 121 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 SUMO2P61956 95 aaKnown RBP5.81□□□□□ -1.48
CD46-213ENST00000471987 MCL1Q07820 350 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 SLC13A2Q13183 592 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 MLC1Q15049 377 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 FAM187BQ17R55 369 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 RNASE12Q5GAN4 147 aaKnown RBP5.81□□□□□ -1.48
CD46-213ENST00000471987 ZNF813Q6ZN06 617 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 DPY19L3Q6ZPD9 716 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms