RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 MRPS31Q92665 395 aaKnown RBP20.09■□□□□ 0.81
COMMD1-207ENST00000471704 SYAP1Q96A49 352 aaPredicted RBP20.09■□□□□ 0.81
COMMD1-207ENST00000471704 SDCBP2Q9H190 292 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 KIF9Q9HAQ2 790 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 C2orf42Q9NWW7 574 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 DLL3Q9NYJ7 618 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 MAGEC2Q9UBF1 373 aaPredicted RBP20.09■□□□□ 0.81
COMMD1-207ENST00000471704 UXTQ9UBK9 157 aaPredicted RBP20.09■□□□□ 0.81
COMMD1-207ENST00000471704 ATG2BQ96BY7 2078 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 CALUO43852 315 aaPredicted RBP20.08■□□□□ 0.81
COMMD1-207ENST00000471704 PHACTR2O75167 634 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 AKAP3O75969 853 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 FAM163BP0C2L3 166 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 NR2F2P24468 414 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 AP3M2P53677 418 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 CYP27A1Q02318 531 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 BIRC3Q13489 604 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 NCOA4Q13772 614 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 ZACNQ401N2 412 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 C4orf50Q6ZRC1 276 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 SCN4BQ8IWT1 228 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 GPR161Q8N6U8 529 aaKnown RBP20.08■□□□□ 0.81
COMMD1-207ENST00000471704 TMC2Q8TDI7 906 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 SNX25Q9H3E2 840 aa20.08■□□□□ 0.81
COMMD1-207ENST00000471704 PTPN1P18031 435 aaKnown RBP20.07■□□□□ 0.8
COMMD1-207ENST00000471704 HOXA6P31267 233 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 USP46P62068 366 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 DMWDQ09019 674 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 RUNX3Q13761 415 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 PUM1Q14671 1186 aaKnown RBP eCLIP20.07■□□□□ 0.8
COMMD1-207ENST00000471704 ZNF699Q32M78 642 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 SCARA5Q6ZMJ2 495 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 SV2AQ7L0J3 742 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 ERCC4Q92889 916 aaPredicted RBP20.07■□□□□ 0.8
COMMD1-207ENST00000471704 CCDC47Q96A33 483 aaKnown RBP20.07■□□□□ 0.8
COMMD1-207ENST00000471704 SLC22A12Q96S37 553 aa20.07■□□□□ 0.8
COMMD1-207ENST00000471704 MAPK13O15264 365 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 HRO43593 1189 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 MAPRE1Q15691 268 aaKnown RBP20.06■□□□□ 0.8
COMMD1-207ENST00000471704 TMEM196Q5HYL7 178 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 TRIM68Q6AZZ1 485 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 SPOPLQ6IQ16 392 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 VSTM1Q6UX27 236 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 SECISBP2LQ93073 1101 aaKnown RBP20.06■□□□□ 0.8
COMMD1-207ENST00000471704 SPATA17Q96L03 361 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 B3GNT5Q9BYG0 378 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 EBF3Q9H4W6 596 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 GCNT4Q9P109 453 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 FRMD4BQ9Y2L6 1034 aa20.06■□□□□ 0.8
COMMD1-207ENST00000471704 MYO16Q9Y6X6 1858 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 MYH10P35580 1976 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 KIAA1549LQ6ZVL6 1849 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 A8MXQ7 604 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 CHURC1-FNTBB4DL54 471 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 CLDN5O00501 218 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 TRDMT1O14717 391 aaKnown RBP20.05■□□□□ 0.8
COMMD1-207ENST00000471704 KIF20AO95235 890 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 TRIM49P0CI25 452 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 TRIM49CP0CI26 452 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 ARSAP15289 507 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 FNTBP49356 437 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 VAMP7P51809 220 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 FAM160A1Q05DH4 1040 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 PPP3CAQ08209 521 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 ZNF667Q5HYK9 610 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 FSTL4Q6MZW2 842 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 LONP2Q86WA8 852 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 B3GALNT2Q8NCR0 500 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 SPATA20Q8TB22 786 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 CEP295NLQ96MC4 621 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 CYP2S1Q96SQ9 504 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 ZNF518BQ9C0D4 1074 aa20.05■□□□□ 0.8
COMMD1-207ENST00000471704 NCOR2Q9Y618 2525 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 IKBKBO14920 756 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 ASS1P00966 412 aaKnown RBP20.04■□□□□ 0.8
COMMD1-207ENST00000471704 HLA-DRAP01903 254 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 CNR2P34972 360 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 GRIK1P39086 918 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 MCCD1P59942 119 aaPredicted RBP20.04■□□□□ 0.8
COMMD1-207ENST00000471704 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 ZNF77Q15935 545 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 LAIR1Q6GTX8 287 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 PAQR9Q6ZVX9 377 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 FAM186BQ8IYM0 893 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 PARD6AQ9NPB6 346 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 HMGXB4Q9UGU5 601 aa20.04■□□□□ 0.8
COMMD1-207ENST00000471704 RALGAPA1Q6GYQ0 2036 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 TRAV19A0A0A6YYK7 116 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 C2orf78A6NCI8 922 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 F8VP50 259 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 USP17L7P0C7H9 530 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 HOXC13P31276 330 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 PRCPP42785 496 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 ASPAP45381 313 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 ADAM9Q13443 819 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 MTF1Q14872 753 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 RSPO4Q2I0M5 234 aaPredicted RBP20.03■□□□□ 0.8
COMMD1-207ENST00000471704 CC2D1AQ6P1N0 951 aaPredicted RBP20.03■□□□□ 0.8
COMMD1-207ENST00000471704 PKN3Q6P5Z2 889 aa20.03■□□□□ 0.8
COMMD1-207ENST00000471704 DGLUCYQ7Z3D6 616 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms