RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 GRIN3AQ8TCU5 1115 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 CLPBQ9H078 707 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ZNF556Q9HAH1 456 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 ADA2Q9NZK5 511 aa8.92□□□□□ -0.98
CD47-204ENST00000471694 TBX3O15119 743 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 VPS26AO75436 327 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 IL1BP01584 269 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 MYBL2P10244 700 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 AXLP30530 894 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 SKOR1P84550 965 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 POU4F1Q01851 419 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 RETSATQ6NUM9 610 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TXNRD3Q86VQ6 643 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 POMGNT2Q8NAT1 580 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 A8MX80 341 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 MIF4GDA9UHW6 222 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 AOC2O75106 756 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 FGF19O95750 216 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 LMNAP02545 664 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 INHAP05111 366 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 GSNP06396 782 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 CASP1P29466 404 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ARHGAP25P42331 645 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 CLK3P49761 638 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 PIGHQ14442 188 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 STAT4Q14765 748 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 CCDC144BQ3MJ40 725 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 NOMO2Q5JPE7 1267 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 POTEAQ6S8J7 498 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 LGI2Q8N0V4 545 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 SMG7Q92540 1137 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 FMO2Q99518 471 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 KCNS3Q9BQ31 491 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 WNT8AQ9H1J5 351 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 RTN2O75298 545 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 APRTP07741 180 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 GEMP55040 296 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 NFIAQ12857 509 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ZNF211Q13398 564 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 ICE2Q659A1 982 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 FRMD5Q7Z6J6 570 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 SLC44A2Q8IWA5 706 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 ZBED8Q8IZ13 594 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 RCOR2Q8IZ40 523 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 MYO1HQ8N1T3 1032 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 NRBF2Q96F24 287 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 SYT15Q9BQS2 421 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 MTMR12Q9C0I1 747 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 HCN4Q9Y3Q4 1203 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ZNF711Q9Y462 761 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 NR2E1Q9Y466 385 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 FER1L4A9Z1Z3 1794 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3DA0A087WVF3 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3IA0A087WXS9 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3EA0A087X179 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3KA0A087X1G2 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3FA6NER0 549 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3LB9A6J9 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 RBAK-RBAKDNI3L0D1 243 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ANXA9O76027 345 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 EIF2S1P05198 315 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3HP0C7X1 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ARSEP51690 589 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 GFPT1Q06210 699 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 ZC2HC1CQ53FD0 456 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 ALS2CLQ60I27 953 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3GQ6DHY5 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3CQ6IPX1 549 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBC1D3Q8IZP1 549 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 PDGFCQ9NRA1 345 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 SMIM22K7EJ46 135 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 SETSIPP0DME0 302 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 PRCPP42785 496 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 C6orf118Q5T5N4 469 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 LUZP2Q86TE4 346 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 SETD3Q86TU7 594 aaPredicted RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 IL17RAQ96F46 866 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 C17orf80Q9BSJ5 609 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ZC4H2Q9NQZ6 224 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TBX20Q9UMR3 447 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 POLR1DQ9Y2S0 133 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 RIC1Q4ADV7 1423 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 OGTO15294 1046 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 CTIFO43310 598 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 ACRP10323 421 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 LAG3P18627 525 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ALDH9A1P49189 494 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 SRSF11Q05519 484 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 DMC1Q14565 340 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 C6orf10Q5SRN2 563 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 RESP18Q5W5W9 173 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 PCNX4Q63HM2 1172 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 TFB1MQ8WVM0 346 aaKnown RBP8.91□□□□□ -0.98
CD47-204ENST00000471694 SHDQ96IW2 340 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 PDE11AQ9HCR9 933 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 PADI4Q9UM07 663 aa8.91□□□□□ -0.98
CD47-204ENST00000471694 ZNF839A8K0R7 811 aa8.9□□□□□ -0.98
CD47-204ENST00000471694 MYO1GB0I1T2 1018 aa8.9□□□□□ -0.98
CD47-204ENST00000471694 IRF6O14896 467 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms