RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 XPO1O14980 1071 aaKnown RBP20.27■□□□□ 0.84
PSPC1-203ENST00000471658 PER2O15055 1255 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 TGM5O43548 720 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 HAPLN1P10915 354 aaPredicted RBP20.27■□□□□ 0.84
PSPC1-203ENST00000471658 GRIK1P39086 918 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 NSFP46459 744 aaKnown RBP20.27■□□□□ 0.84
PSPC1-203ENST00000471658 GALCP54803 685 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 PTP4A2Q12974 167 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 PDCLQ13371 301 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 MGAT5BQ3V5L5 792 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 MMS22LQ6ZRQ5 1243 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 GPRIN1Q7Z2K8 1008 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 PIGZQ86VD9 579 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 SEPT5Q99719 369 aaPredicted RBP20.27■□□□□ 0.84
PSPC1-203ENST00000471658 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.27■□□□□ 0.84
PSPC1-203ENST00000471658 CHORDC1Q9UHD1 332 aaPredicted RBP20.27■□□□□ 0.84
PSPC1-203ENST00000471658 MYO7AQ13402 2215 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 HHLA1C9JL84 531 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 SETSIPP0DME0 302 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 ATF2P15336 505 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 ABCB4P21439 1286 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 SMARCB1Q12824 385 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 HS1BP3Q53T59 392 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 CYP4A22Q5TCH4 519 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 PRPF38BQ5VTL8 546 aaKnown RBP20.27■□□□□ 0.83
PSPC1-203ENST00000471658 TPGS2Q68CL5 300 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 LILRA6Q6PI73 481 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 RBM23Q86U06 439 aaKnown RBP20.27■□□□□ 0.83
PSPC1-203ENST00000471658 ERICH1Q86X53 443 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 PHF13Q86YI8 300 aaPredicted RBP20.27■□□□□ 0.83
PSPC1-203ENST00000471658 MCOLN2Q8IZK6 566 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 GPR152Q8TDT2 470 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 PPP1R13BQ96KQ4 1090 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 TTYH1Q9H313 450 aaPredicted RBP20.27■□□□□ 0.83
PSPC1-203ENST00000471658 CYP4F11Q9HBI6 524 aa20.27■□□□□ 0.83
PSPC1-203ENST00000471658 DMAP1Q9NPF5 467 aaPredicted RBP20.27■□□□□ 0.83
PSPC1-203ENST00000471658 CDH23Q9H251 3354 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 ERBB2P04626 1255 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 ADH1AP07327 375 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 MMP8P22894 467 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 MAGEA11P43364 429 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 PLA2G4AP47712 749 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 MON1BQ7L1V2 547 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 C2orf15Q8WU43 125 aaKnown RBP20.26■□□□□ 0.83
PSPC1-203ENST00000471658 SLC4A5Q9BY07 1137 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 LMAN2LQ9H0V9 348 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 THAP2Q9H0W7 228 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 ABCB6Q9NP58 842 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 ADAM22Q9P0K1 906 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 PTPRDP23468 1912 aa20.26■□□□□ 0.83
PSPC1-203ENST00000471658 E5RJQ4 531 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 ATMINO43313 823 aaPredicted RBP20.25■□□□□ 0.83
PSPC1-203ENST00000471658 CLASP2O75122 1294 aaKnown RBP20.25■□□□□ 0.83
PSPC1-203ENST00000471658 ABL1P00519 1130 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 H2AFZP0C0S5 128 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 LCP1P13796 627 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 SLC8A3P57103 927 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 PDE12Q6L8Q7 609 aaKnown RBP20.25■□□□□ 0.83
PSPC1-203ENST00000471658 VSTM1Q6UX27 236 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 H2AFVQ71UI9 128 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 C17orf53Q8N3J3 647 aaPredicted RBP20.25■□□□□ 0.83
PSPC1-203ENST00000471658 STK32AQ8WU08 396 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 ARHGEF26Q96DR7 871 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 LACRTQ9GZZ8 138 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 PPP2R2CQ9Y2T4 447 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 TRIOBPQ9H2D6 2365 aa20.25■□□□□ 0.83
PSPC1-203ENST00000471658 IPO7O95373 1038 aaKnown RBP20.24■□□□□ 0.83
PSPC1-203ENST00000471658 CLCN4P51793 760 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 KRT83P78385 493 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 TMEM110Q86TL2 294 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 GIPC2Q8TF65 315 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 NDRG1Q92597 394 aaKnown RBP20.24■□□□□ 0.83
PSPC1-203ENST00000471658 LRCH3Q96II8 777 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 MIS12Q9H081 205 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 PRDM12Q9H4Q4 367 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 MYH10P35580 1976 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 TNFRSF10BO14763 440 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 GJB6O95452 261 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 ATF6P18850 670 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 ELF1P32519 619 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 GABRB2P47870 512 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 RPL34P49207 117 aaKnown RBP20.24■□□□□ 0.83
PSPC1-203ENST00000471658 KIAA1328Q86T90 577 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 SCUBE3Q8IX30 993 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 SCAMP5Q8TAC9 235 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 CLEC4CQ8WTT0 213 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 C18orf8Q96DM3 657 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 HSFY1Q96LI6 401 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 C8orf48Q96LL4 319 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 NOX5Q96PH1 765 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 UBXN6Q9BZV1 441 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 SYNCQ9H7C4 482 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 TRMT1Q9NXH9 659 aaKnown RBP20.24■□□□□ 0.83
PSPC1-203ENST00000471658 MYO1AQ9UBC5 1043 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 TRIM10Q9UDY6 481 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 DUSP10Q9Y6W6 482 aa20.24■□□□□ 0.83
PSPC1-203ENST00000471658 COL4A4P53420 1690 aaPredicted RBP20.23■□□□□ 0.83
PSPC1-203ENST00000471658 ANKRD62A6NC57 917 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 USP27XA6NNY8 438 aa20.23■□□□□ 0.83
PSPC1-203ENST00000471658 PRRG1O14668 218 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms