RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 GDAP2Q9NXN4 497 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 SPG21Q9NZD8 308 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 NRP1O14786 923 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 INPPL1O15357 1258 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 ATP8B1O43520 1251 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 PROSCO94903 275 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 ALDH2P05091 517 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 THP07101 528 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 GRIK3Q13003 919 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 SV2CQ496J9 727 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 DENND1BQ6P3S1 775 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 SLC39A11Q8N1S5 342 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 WDTC1Q8N5D0 677 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-208ENST00000471322 FEZF2Q8TBJ5 459 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 PNKPQ96T60 521 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 SMARCAL1Q9NZC9 954 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 EHD2Q9NZN4 543 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 WDR35Q9P2L0 1181 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.45■□□□□ 0.54
HSPG2-208ENST00000471322 FAN1Q9Y2M0 1017 aa18.45■□□□□ 0.54
HSPG2-208ENST00000471322 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
HSPG2-208ENST00000471322 PLXNA4Q9HCM2 1894 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 LRPAP1P30533 357 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 SSTR3P32745 418 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-208ENST00000471322 MAN1A1P33908 653 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 TAF6P49848 677 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 PEX5P50542 639 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 DSC1Q08554 894 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 C8orf74Q6P047 294 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 DNAJC24Q6P3W2 148 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 LCLAT1Q6UWP7 414 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 MICAL1Q8TDZ2 1067 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 HASPINQ8TF76 798 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 MRPL38Q96DV4 380 aaKnown RBP18.44■□□□□ 0.54
HSPG2-208ENST00000471322 TMEM169Q96HH4 297 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 TWNKQ96RR1 684 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 IP6K2Q9UHH9 426 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 TDRD15B5MCY1 1934 aaKnown RBP18.44■□□□□ 0.54
HSPG2-208ENST00000471322 TRIP11Q15643 1979 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 CITO14578 2027 aa18.44■□□□□ 0.54
HSPG2-208ENST00000471322 KPNA7A9QM74 516 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 O00370 1275 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 KRIT1O00522 736 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 IGFBP6P24592 240 aaPredicted RBP18.43■□□□□ 0.54
HSPG2-208ENST00000471322 RWDD2BP57060 319 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 RNASE9P60153 205 aaKnown RBP18.43■□□□□ 0.54
HSPG2-208ENST00000471322 ERVFC1P60507 584 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 MAP9Q49MG5 647 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 DPH6Q7L8W6 267 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 C3orf20Q8ND61 904 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 RSPH1Q8WYR4 309 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 IGSF21Q96ID5 467 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 BTBD6Q96KE9 485 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 PPP1R10Q96QC0 940 aaKnown RBP18.43■□□□□ 0.54
HSPG2-208ENST00000471322 HMGXB4Q9UGU5 601 aa18.43■□□□□ 0.54
HSPG2-208ENST00000471322 GOLGA6L10A0A0M3HER8 536 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 PPEF2O14830 753 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 MICAL2O94851 1124 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 FGGP02679 453 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 CA8P35219 290 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 PPM1AP35813 382 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 GSCP56915 257 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-208ENST00000471322 KRT17Q04695 432 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 SOX4Q06945 474 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-208ENST00000471322 SKIV2LQ15477 1246 aaKnown RBP18.42■□□□□ 0.54
HSPG2-208ENST00000471322 LONRF2Q1L5Z9 754 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 SEL1L2Q5TEA6 688 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 CC2D1AQ6P1N0 951 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-208ENST00000471322 ALG3Q92685 438 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 C18orf8Q96DM3 657 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 LRRC1Q9BTT6 524 aa18.42■□□□□ 0.54
HSPG2-208ENST00000471322 TMEM191CA6NGB0 347 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 HUS1O60921 280 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 SNX16P57768 344 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 VSNL1P62760 191 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 TUSC3Q13454 348 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 ZNF268Q14587 947 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-208ENST00000471322 C2CD6Q53TS8 623 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 DCAF12L1Q5VU92 463 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 PLPP4Q5VZY2 271 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 DCUN1D2Q6PH85 259 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 PHLDB2Q86SQ0 1253 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 RBM23Q86U06 439 aaKnown RBP18.41■□□□□ 0.54
HSPG2-208ENST00000471322 AUTS2Q8WXX7 1259 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 KRT35Q92764 455 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 TCF25Q9BQ70 676 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 MRPL45Q9BRJ2 306 aaKnown RBP18.41■□□□□ 0.54
HSPG2-208ENST00000471322 VN1R3Q9BXE9 311 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 SYNCQ9H7C4 482 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 PRDM6Q9NQX0 595 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 TLR9Q9NR96 1032 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 MARCH5Q9NX47 278 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 TCRBV5S1A1TA0A578 114 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 M0QYV0 167 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 POU3F3P20264 500 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-208ENST00000471322 PLCB3Q01970 1234 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 PIGHQ14442 188 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-208ENST00000471322 SOWAHAQ2M3V2 549 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 TCEAL5Q5H9L2 206 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms