RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CARD9Q9H257 536 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 ADAM7Q9H2U9 754 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 PARVAQ9NVD7 372 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 DZANK1Q9NVP4 752 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 TMEM51Q9NW97 253 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 TUBGCP4Q9UGJ1 667 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 SALL4Q9UJQ4 1053 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTPRE-207ENST00000471218 USTQ9Y2C2 406 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 HES2Q9Y543 173 aa9.68□□□□□ -0.86
PTPRE-207ENST00000471218 ZFHX2Q9C0A1 2572 aaPredicted RBP9.68□□□□□ -0.86
PTPRE-207ENST00000471218 USP34Q70CQ2 3546 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 A0A0U1RQJ8 604 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 GABRDO14764 452 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 GALR2O43603 387 aaPredicted RBP9.67□□□□□ -0.86
PTPRE-207ENST00000471218 PALMO75781 387 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ABL1P00519 1130 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 CYP11A1P05108 521 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 CD58P19256 250 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 PCSK1P29120 753 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 NOP2P46087 812 aaKnown RBP9.67□□□□□ -0.86
PTPRE-207ENST00000471218 GABRB2P47870 512 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 CLCN5P51795 746 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ERVFC1P60507 584 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 TCF15Q12870 199 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 PTP4A2Q12974 167 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ACAP1Q15027 740 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 RPS6KA1Q15418 735 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ATAT1Q5SQI0 421 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 TAF3Q5VWG9 929 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ELMSAN1Q6PJG2 1045 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 KCNT2Q6UVM3 1135 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ARCQ7LC44 396 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 DAAM2Q86T65 1068 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 MRPL43Q8N983 215 aaKnown RBP9.67□□□□□ -0.86
PTPRE-207ENST00000471218 C3orf20Q8ND61 904 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF564Q8TBZ8 553 aaPredicted RBP9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ATRIPQ8WXE1 791 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF653Q96CK0 615 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 HES6Q96HZ4 224 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 SELENOOQ9BVL4 669 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 TLR10Q9BXR5 811 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 OXCT2Q9BYC2 517 aaPredicted RBP9.67□□□□□ -0.86
PTPRE-207ENST00000471218 S1PR5Q9H228 398 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 TAS2R14Q9NYV8 317 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 ADAM22Q9P0K1 906 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 CTTNBP2NLQ9P2B4 639 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 DPP7Q9UHL4 492 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 AMFRQ9UKV5 643 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 SNX9Q9Y5X1 595 aa9.67□□□□□ -0.86
PTPRE-207ENST00000471218 RIF1Q5UIP0 2472 aaKnown RBP9.67□□□□□ -0.86
PTPRE-207ENST00000471218 CFAP54Q96N23 3096 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CCDC66A2RUB6 948 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CTAGE15A4D2H0 777 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 PODXLO00592 558 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 MGEA5O60502 916 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 BUB1BO60566 1050 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 TADA3O75528 432 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ATP1A1P05023 1023 aaKnown RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CTAGE8P0CG41 777 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ODC1P11926 461 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 TYMPP19971 482 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 MLH1P40692 756 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 PAFAH1B1P43034 410 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ACADSBP45954 432 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 NDST1P52848 882 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 SLC8A3P57103 927 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 DSC1Q08554 894 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 KCNC3Q14003 757 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ZNF268Q14587 947 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 MAPRE1Q15691 268 aaKnown RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 UPP1Q16831 310 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 SOWAHAQ2M3V2 549 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CFAP221Q4G0U5 840 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 LRRC38Q5VT99 294 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 NAA35Q5VZE5 725 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 PLPP4Q5VZY2 271 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 DCLRE1AQ6PJP8 1040 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 SCARA5Q6ZMJ2 495 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 PEX26Q7Z412 305 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CTAGE6Q86UF2 777 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 NT5DC3Q86UY8 548 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ERICH1Q86X53 443 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CTAGE4Q8IX94 777 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ADGRF2Q8IZF7 708 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ZDHHC14Q8IZN3 488 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 UBL4BQ8N7F7 174 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 NIPA2Q8N8Q9 360 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 KREMEN2Q8NCW0 462 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 C1orf131Q8NDD1 294 aaKnown RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ACTRT1Q8TDG2 376 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 IPO4Q8TEX9 1081 aaKnown RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 RABGGTAQ92696 567 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 C18orf25Q96B23 403 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 ACSF2Q96CM8 615 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-207ENST00000471218 CYFIP2Q96F07 1278 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 TMEM169Q96HH4 297 aa9.66□□□□□ -0.86
PTPRE-207ENST00000471218 OSBPL9Q96SU4 736 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms