RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 STPG1Q5TH74 334 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 TXNDC8Q6A555 127 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 KLHL10Q6JEL2 608 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 CC2D1AQ6P1N0 951 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-206ENST00000471037 CRELD2Q6UXH1 353 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-206ENST00000471037 ZNF507Q8TCN5 953 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 SCFD1Q8WVM8 642 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 MRPS31Q92665 395 aaKnown RBP9.71□□□□□ -0.86
SF3A1-206ENST00000471037 EXOC4Q96A65 974 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 TRMT2BQ96GJ1 504 aaKnown RBP9.71□□□□□ -0.86
SF3A1-206ENST00000471037 MYRFLQ96LU7 910 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 P2RY13Q9BPV8 354 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 STRA6Q9BX79 667 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 TMEM206Q9H813 350 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 ABCB6Q9NP58 842 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 RXFP3Q9NSD7 469 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 TMLHEQ9NVH6 421 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 UXTQ9UBK9 157 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-206ENST00000471037 RWDD2AQ9UIY3 292 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 CTNND2Q9UQB3 1225 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 DENND4CQ5VZ89 1909 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 USP24Q9UPU5 2620 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 RALGAPA1Q6GYQ0 2036 aa9.71□□□□□ -0.86
SF3A1-206ENST00000471037 IKBKBO14920 756 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 NOL4O94818 638 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 ARSAP15289 507 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 ADSSP30520 456 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 GJA4P35212 333 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 GPR15P49685 360 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 CDR1P51861 262 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 RPL10AP62906 217 aaKnown RBP9.7□□□□□ -0.86
SF3A1-206ENST00000471037 MYL5Q02045 173 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 LRRC63Q05C16 580 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 USP4Q13107 963 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 MTF1Q14872 753 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 ZNF77Q15935 545 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 CCDC6Q16204 474 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 KNOP1Q1ED39 458 aaKnown RBP9.7□□□□□ -0.86
SF3A1-206ENST00000471037 PLK5Q496M5 336 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 L1TD1Q5T7N2 865 aaKnown RBP9.7□□□□□ -0.86
SF3A1-206ENST00000471037 N4BP2L1Q5TBK1 243 aaPredicted RBP9.7□□□□□ -0.86
SF3A1-206ENST00000471037 SYT13Q7L8C5 426 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 GAS2L3Q86XJ1 694 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 PDCL2Q8N4E4 241 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 CPA6Q8N4T0 437 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 GLIS3Q8NEA6 775 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 SPATA18Q8TC71 538 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
SF3A1-206ENST00000471037 OSCP1Q8WVF1 389 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 NELFBQ8WX92 580 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 POMGNT1Q8WZA1 660 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 ACDQ96AP0 544 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 PKMYT1Q99640 499 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 TSG101Q99816 390 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 ACBD6Q9BR61 282 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 PI4K2AQ9BTU6 479 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 FGFBP2Q9BYJ0 223 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 CBX8Q9HC52 389 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 FBRSL1Q9HCM7 1045 aaKnown RBP9.7□□□□□ -0.86
SF3A1-206ENST00000471037 VPS45Q9NRW7 570 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 EBF1Q9UH73 591 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 L1RE1Q9UN81 338 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 MAPK8IP1Q9UQF2 711 aa9.7□□□□□ -0.86
SF3A1-206ENST00000471037 BECN2A8MW95 431 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 GOLGA6L19H0YKK7 550 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 KCNK5O95279 499 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 TCF3P15923 654 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 GALK1P51570 392 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 TPM4P67936 248 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 EML5Q05BV3 1969 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 GSE1Q14687 1217 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 IQCB1Q15051 598 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 ELF2Q15723 593 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 CFAP221Q4G0U5 840 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 TTI2Q6NXR4 508 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 SPAG17Q6Q759 2223 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 BRSK2Q8IWQ3 736 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 NELFCDQ8IXH7 590 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 TMEM86AQ8N2M4 240 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 AOPEPQ8N6M6 819 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 LRRC52Q8N7C0 313 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 C1orf127Q8N9H9 656 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 STKLD1Q8NE28 680 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 CXorf38Q8TB03 319 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 EZH1Q92800 747 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 CD101Q93033 1021 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 ATP2A3Q93084 1043 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 FUBP3Q96I24 572 aaKnown RBP eCLIP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 ACCSQ96QU6 501 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 HHIPQ96QV1 700 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 LSM14BQ9BX40 385 aaKnown RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 DUSP15Q9H1R2 295 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-206ENST00000471037 KCTD10Q9H3F6 313 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 ECT2Q9H8V3 914 aa9.69□□□□□ -0.86
SF3A1-206ENST00000471037 GDAP2Q9NXN4 497 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms