RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 E5RJQ4 531 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PALMO75781 387 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 RB1P06400 928 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 OR1D2P34982 312 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 GABRB2P47870 512 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TUFMP49411 452 aaKnown RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 RABGGTBP53611 331 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 RPL10AP62906 217 aaKnown RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 UBE3AQ05086 875 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 MAMLD1Q13495 774 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TCEAL1Q15170 157 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 RAB30Q15771 203 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 MGAT5BQ3V5L5 792 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PKDCCQ504Y2 493 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 C2CD6Q53TS8 623 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TPGS2Q68CL5 300 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PLEKHA7Q6IQ23 1121 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PMF1Q6P1K2 205 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 CLEC20AQ6ZU45 233 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PEX26Q7Z412 305 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TMEM110Q86TL2 294 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 SLC35F6Q8N357 371 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 WDTC1Q8N5D0 677 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 KLHL23Q8NBE8 558 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TPCN2Q8NHX9 752 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 FEZF2Q8TBJ5 459 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 ATRIPQ8WXE1 791 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 KCTD13Q8WZ19 329 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PGLYRP2Q96PD5 576 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TGS1Q96RS0 853 aaKnown RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 SEPT5Q99719 369 aaPredicted RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 NAPGQ99747 312 aaPredicted RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 TRIM62Q9BVG3 475 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PNPLA8Q9NP80 782 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 IP6K2Q9UHH9 426 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 LZTS1Q9Y250 596 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 JRKLQ9Y4A0 524 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TDRD15B5MCY1 1934 aaKnown RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 TRIP11Q15643 1979 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 LCHNA4D1U4 455 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 SIGLEC16A6NMB1 481 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 F8VP50 259 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 H0YGN5 161 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 PIK3R2O00459 728 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 SPOPO43791 374 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 MTA2O94776 668 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 CXCL14O95715 111 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 ERBB2P04626 1255 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 ADH1AP07327 375 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 CA3P07451 260 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 CTSAP10619 480 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 CYP2F1P24903 491 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 SLC1A1P43005 524 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 SSR1P43307 286 aaKnown RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 MAGEA11P43364 429 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 NDUFV1P49821 464 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 TKTL1P51854 596 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 CDR1P51861 262 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 HADHBP55084 474 aaKnown RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 GSCP56915 257 aaPredicted RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 RNASE9P60153 205 aaKnown RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 SLC6A3Q01959 620 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 ADIGQ0VDE8 80 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 MESDQ14696 234 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 VEPH1Q14D04 833 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 TAF12Q16514 161 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 ODF2Q5BJF6 829 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 EFHC1Q5JVL4 640 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 SLC8B1Q6J4K2 584 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 PAQR9Q6ZVX9 377 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 XYLT1Q86Y38 959 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 SCUBE3Q8IX30 993 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 RNF168Q8IYW5 571 aaPredicted RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 FAM149B1Q96BN6 582 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 MCEEQ96PE7 176 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 PKMYT1Q99640 499 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 TCF25Q9BQ70 676 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 FBXO44Q9H4M3 255 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 NGRNQ9NPE2 291 aaKnown RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 OSGEPQ9NPF4 335 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 CNGB3Q9NQW8 809 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 TMLHEQ9NVH6 421 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 EHD2Q9NZN4 543 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 FNIP2Q9P278 1114 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 AFF4Q9UHB7 1163 aaKnown RBP10.27□□□□□ -0.77
CCM2-204ENST00000470837 CYTH4Q9UIA0 394 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 AMFRQ9UKV5 643 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 MTUS1Q9ULD2 1270 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 MAFFQ9ULX9 164 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCM2-204ENST00000470837 PCDHGC5Q9Y5F6 944 aa10.27□□□□□ -0.77
CCM2-204ENST00000470837 MTMR11A4FU01 709 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms