RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 PAF1Q8N7H5 531 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 PNISRQ8TF01 805 aaKnown RBP4.75□□□□□ -1.65
PRPF3-204ENST00000470824 GCC1Q96CN9 775 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 EID2BQ96D98 161 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 RNF31Q96EP0 1072 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 ZNF668Q96K58 619 aaPredicted RBP4.75□□□□□ -1.65
PRPF3-204ENST00000470824 WWC2-AS2Q96NR7 200 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 TRIM5Q9C035 493 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 CXorf36Q9H7Y0 433 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 GALNT9Q9HCQ5 603 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 NDRG4Q9ULP0 352 aaKnown RBP4.75□□□□□ -1.65
PRPF3-204ENST00000470824 HPSEQ9Y251 543 aa4.75□□□□□ -1.65
PRPF3-204ENST00000470824 CD3EAPO15446 510 aaKnown RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 PPFIA4O75335 1185 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 VEGFAP15692 232 aaPredicted RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 PECAM1P16284 738 aaPredicted RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 NPPBP16860 134 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 ACRV1P26436 265 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 SLC5A2P31639 672 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 CCNIQ14094 377 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 PRKD1Q15139 912 aaPredicted RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 CYP2A13Q16696 494 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 PTCHD3Q3KNS1 767 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 CERCAMQ5T4B2 595 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 ICE2Q659A1 982 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 SP5Q6BEB4 398 aaPredicted RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 RGS7BPQ6MZT1 257 aaPredicted RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 DNAJB14Q8TBM8 379 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 TMEM125Q96AQ2 219 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 OSBPL9Q96SU4 736 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 FAM167BQ9BTA0 163 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 KATNAL1Q9BW62 490 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 ALOXE3Q9BYJ1 711 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 ZCWPW1Q9H0M4 648 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 SLC25A32Q9H2D1 315 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 GBA2Q9HCG7 927 aaPredicted RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 CD248Q9HCU0 757 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 AKIP1Q9NQ31 210 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 CASS4Q9NQ75 786 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 HELLSQ9NRZ9 838 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 DNAJB11Q9UBS4 358 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 HERC5Q9UII4 1024 aaKnown RBP4.74□□□□□ -1.65
PRPF3-204ENST00000470824 MAP3K2Q9Y2U5 619 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 DTNAQ9Y4J8 743 aa4.74□□□□□ -1.65
PRPF3-204ENST00000470824 M0R3H8 397 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 IRAK2O43187 625 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 ASNA1O43681 348 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 WDHD1O75717 1129 aaPredicted RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 NCR1O76036 304 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 TNFRSF6BO95407 300 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 ITGA2BP08514 1039 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 SRGAP2BP0DMP2 458 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 MST1P26927 711 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 SELENOPP49908 381 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 RESTQ13127 1097 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 TOB2Q14106 344 aaPredicted RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 GEN1Q17RS7 908 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 TRIM71Q2Q1W2 868 aaKnown RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 TANGO2Q6ICL3 276 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 CCDC70Q6NSX1 233 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 JMJD6Q6NYC1 403 aaPredicted RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 KLHL17Q6TDP4 642 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 TMPRSS6Q8IU80 811 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 RASGRP3Q8IV61 690 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 CCDC117Q8IWD4 279 aaPredicted RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 CHST13Q8NET6 341 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 RUBCNQ92622 972 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 NACC2Q96BF6 587 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 ZDHHC12Q96GR4 267 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 LOXL4Q96JB6 756 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 ZSCAN31Q96LW9 406 aaPredicted RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 ITM2CQ9NQX7 267 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 TMEM74BQ9NUR3 256 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 INTS13Q9NVM9 706 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 C9orf78Q9NZ63 289 aaPredicted RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 SERTAD3Q9UJW9 196 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 ANAPC4Q9UJX5 808 aa4.73□□□□□ -1.65
PRPF3-204ENST00000470824 SCAF8Q9UPN6 1271 aaKnown RBP4.73□□□□□ -1.65
PRPF3-204ENST00000470824 TRGV11A0A075B6L2 103 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 MARCH11A6NNE9 402 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 IPO5O00410 1097 aaKnown RBP4.72□□□□□ -1.65
PRPF3-204ENST00000470824 FCHO1O14526 889 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 SNX2O60749 519 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 FAM20BO75063 409 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ZFPL1O95159 310 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 NDUFA10O95299 355 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 NTSR2O95665 410 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 VIPP01282 170 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 CSF1RP07333 972 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 GATA3P23771 443 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 EPHA3P29320 983 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 MAPK9P45984 424 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 GATMP50440 423 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 PDE6CP51160 858 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 VAV2P52735 878 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 BCAT1P54687 386 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 ALDH18A1P54886 795 aaKnown RBP4.72□□□□□ -1.65
PRPF3-204ENST00000470824 FAM189BP81408 668 aa4.72□□□□□ -1.65
PRPF3-204ENST00000470824 GPS1Q13098 491 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms