RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 STAG3L1P0CL83 205 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 TTMPQ5BVD1 217 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 MED10Q9BTT4 135 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 ATXN10Q9UBB4 475 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 CORO1CQ9ULV4 474 aaPredicted RBP17.28■□□□□ 0.36
HOXB3-205ENST00000470495 NOD1Q9Y239 953 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.28■□□□□ 0.36
HOXB3-205ENST00000470495 M0QZ92 97 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 PRPSAP2O60256 369 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 BAG2O95816 211 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 IRF5Q13568 498 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 LONRF1Q17RB8 773 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 PPP1R15BQ5SWA1 713 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 SYCP2LQ5T4T6 812 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 C6orf118Q5T5N4 469 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 BSPRYQ5W0U4 402 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 EEF1DP3Q658K8 133 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 ZPBP2Q6X784 338 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 NUDCD3Q8IVD9 361 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 SMC6Q96SB8 1091 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 FAM49BQ9NUQ9 324 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 HACD3Q9P035 362 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 NOCTQ9UK39 431 aaKnown RBP17.28■□□□□ 0.36
HOXB3-205ENST00000470495 TRIM17Q9Y577 477 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 PCDHA3Q9Y5H8 950 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 SMCHD1A6NHR9 2005 aa17.28■□□□□ 0.36
HOXB3-205ENST00000470495 WDR91A4D1P6 747 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 PLCB4Q15147 1175 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 LMO3Q8TAP4 145 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 A0A0B4J269 797 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 ASAP2O43150 1006 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 GAS2O43903 313 aaKnown RBP17.27■□□□□ 0.36
HOXB3-205ENST00000470495 PROSCO94903 275 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 FESP07332 822 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 KRT7P08729 469 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 HSPA9P38646 679 aaKnown RBP17.27■□□□□ 0.36
HOXB3-205ENST00000470495 RPL21P46778 160 aaKnown RBP17.27■□□□□ 0.36
HOXB3-205ENST00000470495 EMC1Q8N766 993 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 PRELID2Q8N945 189 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 SLC43A3Q8NBI5 491 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 GDAP1Q8TB36 358 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 ZNF516Q92618 1163 aa17.27■□□□□ 0.36
HOXB3-205ENST00000470495 TCRBV7S2A1N4TA0A589 114 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 MCF2LO15068 1137 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 MAGEB2O15479 319 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 CST3P01034 146 aaPredicted RBP17.27■□□□□ 0.35
HOXB3-205ENST00000470495 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.35
HOXB3-205ENST00000470495 ARSEP51690 589 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 TUBA1BP68363 451 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 CYLC2Q14093 348 aaPredicted RBP17.27■□□□□ 0.35
HOXB3-205ENST00000470495 LRRC14Q15048 493 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 KYNUQ16719 465 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 DARS2Q6PI48 645 aaKnown RBP17.27■□□□□ 0.35
HOXB3-205ENST00000470495 TUBA1AQ71U36 451 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 CTAGE3PQ8IX95 158 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 MDM1Q8TC05 714 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 HPDLQ96IR7 371 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 IFT122Q9HBG6 1241 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 PCDHGA3Q9Y5H0 932 aa17.27■□□□□ 0.35
HOXB3-205ENST00000470495 H3BRB1 525 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 CETPP11597 493 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 MDH1P40925 334 aaKnown RBP17.26■□□□□ 0.35
HOXB3-205ENST00000470495 ITGA8P53708 1063 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 GPR88Q9GZN0 384 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 SNX25Q9H3E2 840 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 SEMA4AQ9H3S1 761 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 TUT1Q9H6E5 874 aaKnown RBP17.26■□□□□ 0.35
HOXB3-205ENST00000470495 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 CYP1A2P05177 515 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 BBS9Q3SYG4 887 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 TJAP1Q5JTD0 557 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 TMC3Q7Z5M5 1100 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 SPOCK3Q9BQ16 436 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 HEY1Q9Y5J3 304 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 EXOC1LA0A1B0GW35 172 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 ACKR2O00590 384 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 LSP1P33241 339 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 SNX16P57768 344 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 USP46P62068 366 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 AMHR2Q16671 573 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 C1orf220Q5T0J3 134 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 LRIG3Q6UXM1 1119 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 GPR20Q99678 358 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 NEUROG2Q9H2A3 272 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 TXNRD2Q9NNW7 524 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 SUN2Q9UH99 717 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 AGPSO00116 658 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 FOSL1P15407 271 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 ARL2P36404 184 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 EIF2B2P49770 351 aaKnown RBP17.26■□□□□ 0.35
HOXB3-205ENST00000470495 PPIL2Q13356 520 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 ATP13A4Q4VNC1 1196 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 NAF1Q96HR8 494 aaKnown RBP17.26■□□□□ 0.35
HOXB3-205ENST00000470495 GCOM2Q9BZD3 368 aaPredicted RBP17.26■□□□□ 0.35
HOXB3-205ENST00000470495 TMEM134Q9H6X4 195 aa17.26■□□□□ 0.35
HOXB3-205ENST00000470495 PIN4Q9Y237 131 aaKnown RBP17.26■□□□□ 0.35
HOXB3-205ENST00000470495 CELF2O95319 508 aaKnown RBP17.25■□□□□ 0.35
HOXB3-205ENST00000470495 ARIH2O95376 493 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms