RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 PATL1Q86TB9 770 aaKnown RBP9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 RSPH3Q86UC2 560 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 DEFB107AQ8IZN7 70 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 DCUN1D1Q96GG9 259 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 ABHD8Q96I13 439 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 CSRNP1Q96S65 589 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 P2RX7Q99572 595 aaKnown RBP9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 MAF1Q9H063 256 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 Q9H521 79 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 IFT122Q9HBG6 1241 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 DMAC2Q9NW81 257 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 ZDHHC7Q9NXF8 308 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 PKD2L1Q9P0L9 805 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 MAD1L1Q9Y6D9 718 aa9.95□□□□□ -0.82
NHLRC3-203ENST00000470258 C10orf71Q711Q0 1435 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 POLR2MP0CAP2 368 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 TCF4P15884 667 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 CIITAP33076 1130 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 STT3AP46977 705 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ALDH1A3P47895 512 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 MTTPP55157 894 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 BASP1P80723 227 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 CLEC16AQ2KHT3 1053 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 RNASEH2BQ5TBB1 312 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 AAGABQ6PD74 315 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 MFSD7Q6UXD7 560 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 CDHR3Q6ZTQ4 885 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 C1orf186Q6ZWK4 172 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 NUDCD3Q8IVD9 361 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 MCOLN2Q8IZK6 566 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 DCAKDQ8WVC6 231 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ERLEC1Q96DZ1 483 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ACSS3Q9H6R3 686 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ANLNQ9NQW6 1124 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 STRIP2Q9ULQ0 834 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 SRCAPQ6ZRS2 3230 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 TRIM49D1C9J1S8 452 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 DDX39AO00148 427 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 PROSCO94903 275 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 SLITRK3O94933 977 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ZFXP17010 805 aaPredicted RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ALDH1B1P30837 517 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 PDK1Q15118 436 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 HSF5Q4G112 596 aaPredicted RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 C6orf52Q5T4I8 152 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 TRIML2Q8N7C3 387 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 PPM1NQ8N819 430 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 FNDC8Q8TC99 324 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 PLEKHO2Q8TD55 490 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 DIS3LQ8TF46 1054 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 GIPC3Q8TF64 312 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 SHC3Q92529 594 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 NT5C1BQ96P26 610 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 SENP7Q9BQF6 1050 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 INIPQ9NRY2 104 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 AP4B1Q9Y6B7 739 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ARHGEF35A5YM69 484 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 C6orf229H3BNL8 230 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 TLR3O15455 904 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 PEX1O43933 1283 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 NCF2P19878 526 aaPredicted RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 COPAP53621 1224 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 BMPR2Q13873 1038 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 OASLQ15646 514 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 INTS5Q6P9B9 1019 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 ALLCQ8N6M5 410 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 CFAP36Q96G28 342 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 SSU72Q9NP77 194 aaKnown RBP9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 HOMER2Q9NSB8 354 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 HSPBP1Q9NZL4 362 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 WDR37Q9Y2I8 494 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 TELO2Q9Y4R8 837 aa9.94□□□□□ -0.82
NHLRC3-203ENST00000470258 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 XPOTO43592 962 aaKnown RBP9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 TBC1D12O60347 775 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 FOXD2O60548 495 aaPredicted RBP9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 PDGFRBP09619 1106 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 MSX2P35548 267 aaPredicted RBP9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 GJA8P48165 433 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 GPSM2P81274 684 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 MFSD4BQ5TF39 518 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 ATG16L1Q676U5 607 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 PDIK1LQ8N165 341 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 NUP93Q8N1F7 819 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 XXYLT1Q8NBI6 393 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 TAS1R2Q8TE23 839 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 ZFRQ96KR1 1074 aaKnown RBP9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 LRGUKQ96M69 825 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 TRIM56Q9BRZ2 755 aaKnown RBP9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 EPB41L1Q9H4G0 881 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 SHOC2Q9UQ13 582 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 POMPQ9Y244 141 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 BTAF1O14981 1849 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 TNFAIP8O95379 198 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 ETV4P43268 484 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 NT5C2P49902 561 aa9.93□□□□□ -0.82
NHLRC3-203ENST00000470258 ENTPD1P49961 510 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms