RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ENDOD1O94919 500 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 CCNDBP1O95273 360 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ANP32DO95626 131 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ATP6V1G2O95670 118 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 PRLP01236 227 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 HOXB8P17481 243 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 CALB2P22676 271 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SP100P23497 879 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ITPKAP23677 461 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 GNA11P29992 359 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 HOXA11P31270 313 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 PTPN9P43378 593 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 CPA2P48052 419 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 POLE2P56282 527 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 GPX6P59796 221 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 RAB14P61106 215 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF33BQ06732 778 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SCRN3Q0VDG4 424 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 DUSP4Q13115 394 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 DMC1Q14565 340 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 HERC3Q15034 1050 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SLC39A14Q15043 492 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 DPYSL2Q16555 572 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 PFKFB3Q16875 520 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 TPD52L1Q16890 204 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 LONRF2Q1L5Z9 754 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 AAK1Q2M2I8 961 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 LACTB2Q53H82 288 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 TDRD12Q587J7 1177 aaKnown RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ODF2Q5BJF6 829 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SLC45A4Q5BKX6 768 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SLFN13Q68D06 897 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 OR52E8Q6IFG1 317 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 RAB12Q6IQ22 244 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 OGFOD3Q6PK18 319 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ADAMTSL4Q6UY14 1074 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 C4orf22Q6V702 233 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ZYG11AQ6WRX3 759 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 Q6ZNX1 250 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 C4orf50Q6ZRC1 276 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ENOSF1Q7L5Y1 443 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 KRT74Q7RTS7 529 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 TRPM8Q7Z2W7 1104 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 KDELC2Q7Z4H8 507 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 KCTD20Q7Z5Y7 419 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 STRA8Q7Z7C7 330 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ADAMTSL2Q86TH1 951 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 FAM35AQ86V20 835 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 MAP7D3Q8IWC1 876 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 CSGALNACT2Q8N6G5 542 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 MFSD2AQ8NA29 543 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 FBXO15Q8NCQ5 510 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 OR56B2PQ8NGI1 322 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 NEDD1Q8NHV4 660 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF507Q8TCN5 953 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 XAGE3Q8WTP9 111 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 RAB7BQ96AH8 199 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 RAD51AP1Q96B01 352 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SLC22A18Q96BI1 424 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 TIFAQ96CG3 184 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 HAUS1Q96CS2 278 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 STAMBPL1Q96FJ0 436 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SUCLG2Q96I99 432 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 NOX5Q96PH1 765 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 BARD1Q99728 777 aaKnown RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 SELENOSQ9BQE4 189 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 HEPHQ9BQS7 1158 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 PACSIN1Q9BY11 444 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 RHOBTB2Q9BYZ6 727 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 C2orf40Q9H1Z8 148 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 KCNN2Q9H2S1 579 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF576Q9H609 170 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 CAAP1Q9H8G2 361 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 GORASP2Q9H8Y8 452 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 NOD2Q9HC29 1040 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 PRDM5Q9NQX1 630 aaPredicted RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 GID8Q9NWU2 228 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 KLHL3Q9UH77 587 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 TRPS1Q9UHF7 1281 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 VPS51Q9UID3 782 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 LNPEPQ9UIQ6 1025 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 GAB2Q9UQC2 676 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ERVK-19Q9WJR5 959 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 MTMR6Q9Y217 621 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 AP3M1Q9Y2T2 418 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 PDS5AQ29RF7 1337 aaKnown RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 ATP10AO60312 1499 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 TCOF1Q13428 1488 aaKnown RBP5.37□□□□□ -1.55
COL3A1-205ENST00000470167 NESP48681 1621 aa5.37□□□□□ -1.55
COL3A1-205ENST00000470167 VWA3AA6NCI4 1184 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 E7ENQ6 273 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 FBP2O00757 339 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 RGS13O14921 159 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 SLC22A1O15245 554 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 FANCGO15287 622 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 ALOX15BO15296 676 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 CIDEAO60543 219 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 RBBP9O75884 186 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 KLHL18O94889 574 aa5.36□□□□□ -1.55
COL3A1-205ENST00000470167 PRPF6O94906 941 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms