RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 HSP90AB2PQ58FF8 381 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 CERCAMQ5T4B2 595 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 CACHD1Q5VU97 1274 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 ZDHHC24Q6UX98 284 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 YAF2Q8IY57 180 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 ABRAQ8N0Z2 381 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 FAM98AQ8NCA5 519 aaKnown RBP4.81□□□□□ -1.64
BRCA2-202ENST00000470094 XAGE5Q8WWM1 108 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 SARAFQ96BY9 339 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 R3HDM4Q96D70 268 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 BBC3Q96PG8 261 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-202ENST00000470094 APOL5Q9BWW9 433 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 COL20A1Q9P218 1284 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 PTGFRNQ9P2B2 879 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 ARPP21Q9UBL0 812 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-202ENST00000470094 CCNL1Q9UK58 526 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-202ENST00000470094 TBC1D30Q9Y2I9 924 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 SNX13Q9Y5W8 968 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 CDY1Q9Y6F8 540 aa4.81□□□□□ -1.64
BRCA2-202ENST00000470094 FOXN3O00409 490 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 RGS10O43665 173 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 PQBP1O60828 265 aaKnown RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 RASAL1O95294 804 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 C1RP00736 705 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 PRKAR1BP31321 381 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 CYP2C18P33260 490 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 TPTEP56180 551 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 ANKRD16Q6P6B7 361 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 ZNF804AQ7Z570 1209 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 WDR53Q7Z5U6 358 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 AMIGO2Q86SJ2 522 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 CCAR1Q8IX12 1150 aaKnown RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 IZUMO1Q8IYV9 350 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 KRT78Q8N1N4 520 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 SMCR8Q8TEV9 937 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 TMEM171Q8WVE6 324 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 IPCEF1Q8WWN9 437 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 SOCS4Q8WXH5 440 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 MSLNLQ96KJ4 702 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 GBA2Q9HCG7 927 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 ITGB1BP2Q9UKP3 347 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 SNX14Q9Y5W7 946 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 WNT6Q9Y6F9 365 aa4.8□□□□□ -1.64
BRCA2-202ENST00000470094 ARHGEF17Q96PE2 2063 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-202ENST00000470094 H7C4K7 107 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 OVOL3O00110 214 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 SRGAP2O75044 1071 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 PROP1O75360 226 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 C1QL1O75973 258 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 INMTO95050 263 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 ERBB2P04626 1255 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 FAM163BP0C2L3 166 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 TXNP10599 105 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 JUPP14923 745 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 ENGP17813 658 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 ACVR2AP27037 513 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 ITPKBP27987 946 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 PTDSS1P48651 473 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 EEFSECP57772 596 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 CCNIQ14094 377 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 HLTFQ14527 1009 aaKnown RBP eCLIP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 SLC29A2Q14542 456 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 AARS2Q5JTZ9 985 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 RP9Q8TA86 221 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 DNAJB14Q8TBM8 379 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 ZNF384Q8TF68 577 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 TBC1D5Q92609 795 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 PHKBQ93100 1093 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 STRBPQ96SI9 672 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 UNKQ9C0B0 810 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 CHST8Q9H2A9 424 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 PNPLA8Q9NP80 782 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 GEMIN8Q9NWZ8 242 aaKnown RBP4.79□□□□□ -1.64
BRCA2-202ENST00000470094 MID2Q9UJV3 735 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 PADI4Q9UM07 663 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 FAM50BQ9Y247 325 aa4.79□□□□□ -1.64
BRCA2-202ENST00000470094 LRRC3CA6NJW4 275 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 RHPN2P1A8MT19 583 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 H0YIZ8 118 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 RAB27BO00194 218 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 RRP9O43818 475 aaKnown RBP4.78□□□□□ -1.64
BRCA2-202ENST00000470094 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
BRCA2-202ENST00000470094 NPSP0C0P6 89 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 TPH1P17752 444 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 CD38P28907 300 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 CARSP49589 748 aaKnown RBP4.78□□□□□ -1.64
BRCA2-202ENST00000470094 MTHFSP49914 203 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 CPT1AP50416 773 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 ITGA8P53708 1063 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 BCAT1P54687 386 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 SAFBQ15424 915 aaKnown RBP eCLIP4.78□□□□□ -1.64
BRCA2-202ENST00000470094 COBLL1Q53SF7 1204 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 DPY19L2P1Q6NXN4 242 aa4.78□□□□□ -1.64
BRCA2-202ENST00000470094 CEP85Q6P2H3 762 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms