RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CTDNEP1O95476 244 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
LSM2-209ENST00000470083 HDCP19113 662 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 PDE6CP51160 858 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 ZXDBP98169 803 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 TSPY1Q01534 308 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 RESTQ13127 1097 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 DHCR24Q15392 516 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
LSM2-209ENST00000470083 DDR2Q16832 855 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 TRMT11Q7Z4G4 463 aaKnown RBP12.91□□□□□ -0.34
LSM2-209ENST00000470083 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 MARCH9Q86YJ5 346 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 CD302Q8IX05 232 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 FSIP1Q8NA03 581 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 SPRYD3Q8NCJ5 442 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 SETD7Q8WTS6 366 aaKnown RBP12.91□□□□□ -0.34
LSM2-209ENST00000470083 ZNF419Q96HQ0 510 aaPredicted RBP12.91□□□□□ -0.34
LSM2-209ENST00000470083 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
LSM2-209ENST00000470083 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 RPF1Q9H9Y2 349 aaKnown RBP12.91□□□□□ -0.34
LSM2-209ENST00000470083 ZDHHC4Q9NPG8 344 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 KCNG1Q9UIX4 513 aa12.91□□□□□ -0.34
LSM2-209ENST00000470083 PTPRQQ9UMZ3 2332 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 CAPN8A6NHC0 703 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.9□□□□□ -0.34
LSM2-209ENST00000470083 E9PAM4 449 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 LEFTY2O00292 366 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 CAPN9O14815 690 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 PFKFB2O60825 505 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 NFICP08651 508 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 ATXN1LP0C7T5 689 aaKnown RBP12.9□□□□□ -0.34
LSM2-209ENST00000470083 FDPSP14324 419 aaKnown RBP12.9□□□□□ -0.34
LSM2-209ENST00000470083 PFKLP17858 780 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 TAF6P49848 677 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 SMTNP53814 917 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 C1orf186Q6ZWK4 172 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 FILIP1Q7Z7B0 1213 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 RGL4Q8IZJ4 473 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 FOXJ1Q92949 421 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 CDC6Q99741 560 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 TM6SF1Q9BZW5 370 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 DERAQ9Y315 318 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 GOLGA4Q13439 2230 aaKnown RBP12.9□□□□□ -0.34
LSM2-209ENST00000470083 TSC2P49815 1807 aa12.9□□□□□ -0.34
LSM2-209ENST00000470083 UNC79Q9P2D8 2635 aa12.9□□□□□ -0.35
LSM2-209ENST00000470083 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.35
LSM2-209ENST00000470083 SFI1A8K8P3 1242 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 SLC9A3R1O14745 358 aaPredicted RBP12.89□□□□□ -0.35
LSM2-209ENST00000470083 OGTO15294 1046 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 ADH1CP00326 375 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 PLS3P13797 630 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 CYP2F1P24903 491 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 ITPKBP27987 946 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
LSM2-209ENST00000470083 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
LSM2-209ENST00000470083 KDSRQ06136 332 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
LSM2-209ENST00000470083 TMEM132DQ14C87 1099 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 WDR45BQ5MNZ6 344 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 RINT1Q6NUQ1 792 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 ZNF513Q8N8E2 541 aaPredicted RBP12.89□□□□□ -0.35
LSM2-209ENST00000470083 BICD1Q96G01 975 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 CYP8B1Q9UNU6 501 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 DNM3Q9UQ16 869 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 ATMQ13315 3056 aa12.89□□□□□ -0.35
LSM2-209ENST00000470083 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 MGAQ8IWI9 3026 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 FAM149AA5PLN7 773 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 E9PMD0 336 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 FLRT2O43155 660 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 ZBTB24O43167 697 aaPredicted RBP12.88□□□□□ -0.35
LSM2-209ENST00000470083 REC8O95072 547 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 CER1O95813 267 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 ADH5P11766 374 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 HOXB2P14652 356 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 CDC25AP30304 524 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
LSM2-209ENST00000470083 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 DBX2Q6ZNG2 339 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 FAM212AQ96EL1 285 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
LSM2-209ENST00000470083 PRDM16Q9HAZ2 1276 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 IL21RQ9HBE5 538 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 TM7SF3Q9NS93 570 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 LRWD1Q9UFC0 647 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
LSM2-209ENST00000470083 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
LSM2-209ENST00000470083 PCDHGB2Q9Y5G2 931 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms