RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 HSFY1Q96LI6 401 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 TTLL2Q9BWV7 592 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 NLRC4Q9NPP4 1024 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 FAM49BQ9NUQ9 324 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 TSPAN16Q9UKR8 245 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 CAPN11Q9UMQ6 739 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 USP15Q9Y4E8 981 aaPredicted RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 CEP83Q9Y592 693 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 BZW2Q9Y6E2 419 aaKnown RBP13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 ATG2AQ2TAZ0 1938 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 NCANO14594 1321 aa13.36□□□□□ -0.27
SPTLC1-204ENST00000469778 SLC38A8A6NNN8 435 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 CLDN5O00501 218 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 XPO1O14980 1071 aaKnown RBP13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 THAP12O43422 761 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 CYP11B1P15538 503 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 DDX6P26196 483 aaKnown RBP eCLIP13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 ADORA2BP29275 332 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 KLK7P49862 253 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 PDE6CP51160 858 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 ZBED6P86452 979 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 ORC1Q13415 861 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 PKDCCQ504Y2 493 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 TRIM72Q6ZMU5 477 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 CLEC20AQ6ZU45 233 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 OTOP3Q7RTS5 596 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 DRC7Q8IY82 874 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 TTC9BQ8N6N2 239 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 SLC35F5Q8WV83 523 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 TFAP2BQ92481 460 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 SLITRK1Q96PX8 696 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 GCNAQ96QF7 691 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 SMOQ99835 787 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 MIS12Q9H081 205 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 GDE1Q9NZC3 331 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 AIPL1Q9NZN9 384 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 DNMT3BQ9UBC3 853 aaKnown RBP13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 LUC7L2Q9Y383 392 aaKnown RBP13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
SPTLC1-204ENST00000469778 FAM92AA1XBS5 289 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 EPHB6O15197 1021 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 RHOP08100 348 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 HMGA1P17096 107 aaKnown RBP13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 FSHRP23945 695 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 ACADSBP45954 432 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 RPL34P49207 117 aaKnown RBP13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 PSEN1P49768 467 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 MAP3K7CLP57077 242 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 GOLGA7BQ2TAP0 167 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 GRASPQ7Z6J2 395 aaPredicted RBP13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 VSTM4Q8IW00 320 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 SCML4Q8N228 414 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 ARHGAP18Q8N392 663 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 BAP1Q92560 729 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 LPIN3Q9BQK8 851 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 CORO1BQ9BR76 489 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 PHF7Q9BWX1 381 aaPredicted RBP13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 MRPS23Q9Y3D9 190 aaKnown RBP13.34□□□□□ -0.27
SPTLC1-204ENST00000469778 PLXNA3P51805 1871 aa13.33□□□□□ -0.27
SPTLC1-204ENST00000469778 SART1O43290 800 aaKnown RBP13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 GFPT2O94808 682 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 BRD2P25440 801 aaKnown RBP13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 YWHAQP27348 245 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 WEE1P30291 646 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 PRKCIP41743 596 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 GPD2P43304 727 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 KIF11P52732 1056 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 CDR2Q01850 454 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 TSR1Q2NL82 804 aaKnown RBP13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 ARHGAP15Q53QZ3 475 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 RAB41Q5JT25 222 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 SFMBT2Q5VUG0 894 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 SNX30Q5VWJ9 437 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 PIGZQ86VD9 579 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 SLC47A2Q86VL8 602 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 TTC30AQ86WT1 665 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 TMEM35BQ8NCS4 154 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 MSANTD4Q8NCY6 345 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 STKLD1Q8NE28 680 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 ZMIZ2Q8NF64 920 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 GIPC2Q8TF65 315 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 NXPE3Q969Y0 559 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 TRIM62Q9BVG3 475 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.28
SPTLC1-204ENST00000469778 AJAP1Q9UKB5 411 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms