RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
PTCD3-208ENST00000469585 WDR19Q8NEZ3 1342 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 ADGRA2Q96PE1 1338 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 CPLX1O14810 134 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 AKAP10O43572 662 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 NRP2O60462 931 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 ICAM1P05362 532 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 PDHBP11177 359 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 CASTP20810 708 aaKnown RBP7.1□□□□□ -1.27
PTCD3-208ENST00000469585 ADORA2AP29274 412 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 KCNC1P48547 511 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 SLC5A3P53794 718 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 CDK17Q00537 523 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 ZNF543Q08ER8 600 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 USP10Q14694 798 aaKnown RBP7.1□□□□□ -1.27
PTCD3-208ENST00000469585 CLUL1Q15846 466 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 ANO4Q32M45 955 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 KLHDC10Q6PID8 442 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 GPR155Q7Z3F1 870 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 SLC2A13Q96QE2 648 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 MOV10L1Q9BXT6 1211 aaKnown RBP7.1□□□□□ -1.27
PTCD3-208ENST00000469585 R3HDMLQ9H3Y0 253 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 SLC38A10Q9HBR0 1119 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 RAVER2Q9HCJ3 691 aaKnown RBP7.1□□□□□ -1.27
PTCD3-208ENST00000469585 TCF7L1Q9HCS4 588 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 IL17RBQ9NRM6 502 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 ZDHHC9Q9Y397 364 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 MRPL11Q9Y3B7 192 aaKnown RBP7.1□□□□□ -1.27
PTCD3-208ENST00000469585 MRFAP1Q9Y605 127 aa7.1□□□□□ -1.27
PTCD3-208ENST00000469585 ABCB11O95342 1321 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ASB14A6NK59 587 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 KLRF2D3W0D1 207 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ATP2A1O14983 1001 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ZBTB43O43298 467 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 XPOTO43592 962 aaKnown RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 TRIM13O60858 407 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 CDKL5O76039 1030 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ABLIM3O94929 683 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 LY86O95711 162 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 TFRCP02786 760 aaKnown RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 HNRNPLP14866 589 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 XBP1P17861 261 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 CCND1P24385 295 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 LIFRP42702 1097 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 RECQLP46063 649 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 MRE11P49959 708 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 SESN2P58004 480 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 CD69Q07108 199 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ADAM15Q13444 863 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 PIN1Q13526 163 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 NECTIN1Q15223 517 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 TMEM240Q5SV17 173 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 NOL8Q76FK4 1167 aaKnown RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 MSL3Q8N5Y2 521 aaKnown RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ZSCAN18Q8TBC5 510 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 CCDC12Q8WUD4 166 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ANKS1AQ92625 1134 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 GFM2Q969S9 779 aaKnown RBP7.09□□□□□ -1.27
PTCD3-208ENST00000469585 TEKT5Q96M29 485 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 MAP3K14Q99558 947 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 ARHGAP39Q9C0H5 1083 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 MAF1Q9H063 256 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 VAT1LQ9HCJ6 419 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 TXNRD2Q9NNW7 524 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 AASDHPPTQ9NRN7 309 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 RNF146Q9NTX7 359 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 FBXO28Q9NVF7 368 aa7.09□□□□□ -1.27
PTCD3-208ENST00000469585 RPTORQ8N122 1335 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 A0A1W2PR48 441 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 E2F8A0AVK6 867 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 C2orf78A6NCI8 922 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 SMIM22K7EJ46 135 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 B4GALT3O60512 393 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 GAAP10253 952 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 XPAP23025 273 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-208ENST00000469585 HSPA4P34932 840 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 SLC16A2P36021 539 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 MEOX1P50221 254 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 METAP2P50579 478 aaKnown RBP eCLIP7.08□□□□□ -1.28
PTCD3-208ENST00000469585 RCAN1P53805 252 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 RRADP55042 308 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 NRG3P56975 720 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 CCT2P78371 535 aaKnown RBP7.08□□□□□ -1.28
PTCD3-208ENST00000469585 GRB14Q14449 540 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 ACAP2Q15057 778 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 ADRM1Q16186 407 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 CDC37Q16543 378 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-208ENST00000469585 NFE2Q16621 373 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-208ENST00000469585 MAN2A1Q16706 1144 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 USH1GQ495M9 461 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 AGBL4Q5VU57 503 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 MBNL2Q5VZF2 373 aaKnown RBP7.08□□□□□ -1.28
PTCD3-208ENST00000469585 BTNL9Q6UXG8 535 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 CHST3Q7LGC8 479 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 MICU3Q86XE3 530 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 SIAH1Q8IUQ4 282 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 GLB1L2Q8IW92 636 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 CPA6Q8N4T0 437 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 SAMD3Q8N6K7 520 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms