RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PHKA2P46019 1235 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 AP3M2P53677 418 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 KRT81Q14533 505 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 CCDC142Q17RM4 750 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 HHATQ5VTY9 493 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 ZNF449Q6P9G9 518 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 IGDCC3Q8IVU1 814 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 MAML1Q92585 1016 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 CFAP36Q96G28 342 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 PDZD7Q9H5P4 517 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 ADARB2Q9NS39 739 aaKnown RBP18.68■□□□□ 0.58
MCF2L-221ENST00000469415 CLEC11AQ9Y240 323 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 MED7O43513 233 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 B4GALT4O60513 344 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 RASSF9O75901 435 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 AKAP5P24588 427 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 PRAMEF19Q5SWL8 479 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 CGB2Q6NT52 195 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 ILDR2Q71H61 639 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 NDRG1Q92597 394 aaKnown RBP18.68■□□□□ 0.58
MCF2L-221ENST00000469415 C18orf25Q96B23 403 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-221ENST00000469415 STRIP2Q9ULQ0 834 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 IGKV6-21A0A0C4DH24 114 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 C3orf70A6NLC5 250 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-221ENST00000469415 FAM155BO75949 473 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 NPTXRO95502 500 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 TAC1P20366 129 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 ADORA2BP29275 332 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 FAM183BPQ6ZVS7 135 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 TRABD2AQ86V40 505 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 DPP3Q9NY33 737 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 SNTG2Q9NY99 539 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 L3MBTL1Q9Y468 752 aa18.68■□□□□ 0.58
MCF2L-221ENST00000469415 ARID2Q68CP9 1835 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 MCF2LO15068 1137 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 KRT7P08729 469 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 ADORA2AP29274 412 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 IL9RQ01113 521 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 GOLGA7BQ2TAP0 167 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 PLPPR4Q7Z2D5 763 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 OR6B3Q8NGW1 331 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 CLEC4CQ8WTT0 213 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 KLHL29Q96CT2 875 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 DDX56Q9NY93 547 aaKnown RBP18.67■□□□□ 0.58
MCF2L-221ENST00000469415 TNFSF13BQ9Y275 285 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 CLUHO75153 1309 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 IGF2BP3O00425 579 aaKnown RBP eCLIP18.67■□□□□ 0.58
MCF2L-221ENST00000469415 ADRA1DP25100 572 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 RDXP35241 583 aaKnown RBP18.67■□□□□ 0.58
MCF2L-221ENST00000469415 RABGGTBP53611 331 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 MGAT5Q09328 741 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 SURF1Q15526 300 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 CA9Q16790 459 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 PPP1R26Q5T8A7 1209 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-221ENST00000469415 LVRNQ6Q4G3 990 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 SLC35B2Q8TB61 432 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 TMEM237Q96Q45 408 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 MRPL45Q9BRJ2 306 aaKnown RBP18.67■□□□□ 0.58
MCF2L-221ENST00000469415 KDM4CQ9H3R0 1056 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 RAB6BQ9NRW1 208 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 KLHL14Q9P2G3 628 aa18.67■□□□□ 0.58
MCF2L-221ENST00000469415 CILPO75339 1184 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 GPD2P43304 727 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 BSPRYQ5W0U4 402 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PMF1Q6P1K2 205 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 SGSM3Q96HU1 749 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 CDHR5Q9HBB8 845 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 CACNG4Q9UBN1 327 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 KCNN4O15554 427 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PRPSAP2O60256 369 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 RPSAP08865 295 aaKnown RBP18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PROZP22891 400 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 ELK3P41970 407 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 SNCBQ16143 134 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 P3H4Q92791 437 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 ACAP3Q96P50 834 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 WDR83Q9BRX9 315 aaKnown RBP18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PCDH9Q9HC56 1237 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PCDHGC3Q9UN70 934 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PPP2R3BQ9Y5P8 575 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 H3BRB1 525 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 SLC25A27O95847 323 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 GJA5P36382 358 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 MORF4L2Q15014 288 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 DPP9Q86TI2 863 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 FAM228AQ86W67 206 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 FAF2Q96CS3 445 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PAFAH2Q99487 392 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 CEP41Q9BYV8 373 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 ZNF518BQ9C0D4 1074 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 TUT1Q9H6E5 874 aaKnown RBP18.66■□□□□ 0.58
MCF2L-221ENST00000469415 GOLGA2P5Q9HBQ8 144 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 PRMT7Q9NVM4 692 aaPredicted RBP18.66■□□□□ 0.58
MCF2L-221ENST00000469415 TUBGCP4Q9UGJ1 667 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 GGA2Q9UJY4 613 aa18.66■□□□□ 0.58
MCF2L-221ENST00000469415 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.66■□□□□ 0.58
MCF2L-221ENST00000469415 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 LGR5O75473 907 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 HMGCRP04035 888 aa18.65■□□□□ 0.58
MCF2L-221ENST00000469415 FGFR1P11362 822 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms