RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 EML5Q05BV3 1969 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 ZNF840PA6NDX5 716 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 OBSL1O75147 1896 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 CAVIN2O95810 425 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 CST3P01034 146 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-207ENST00000469093 TNNC2P02585 160 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 PFKLP17858 780 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 SYT1P21579 422 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 WARSP23381 471 aaKnown RBP13.09□□□□□ -0.31
COL5A1-207ENST00000469093 HOXD13P35453 343 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 OPRD1P41143 372 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 PDE6CP51160 858 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 DGKEP52429 567 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 SLC39A14Q15043 492 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
COL5A1-207ENST00000469093 C2orf27AQ580R0 203 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 DENND5BQ6ZUT9 1274 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 HPS3Q969F9 1004 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 MYLPFQ96A32 169 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 PCED1BQ96HM7 432 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 TRPM5Q9NZQ8 1165 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 USP24Q9UPU5 2620 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 NME7Q9Y5B8 376 aa13.09□□□□□ -0.31
COL5A1-207ENST00000469093 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-207ENST00000469093 ANAPC1Q9H1A4 1944 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 C4orf47A7E2U8 309 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 LEFTY2O00292 366 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 NFATC1O95644 943 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 GBP1P32455 592 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 GNL1P36915 607 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-207ENST00000469093 SEC13P55735 322 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 SLC7A9P82251 487 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 CYP27A1Q02318 531 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 SURF1Q15526 300 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 USP39Q53GS9 565 aaKnown RBP13.08□□□□□ -0.32
COL5A1-207ENST00000469093 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 CCDC65Q8IXS2 484 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 PDILTQ8N807 584 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 TSTD1Q8NFU3 115 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 MYCBPAPQ8TBZ2 947 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 MMS19Q96T76 1030 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 MRPL45Q9BRJ2 306 aaKnown RBP13.08□□□□□ -0.32
COL5A1-207ENST00000469093 TTLL2Q9BWV7 592 aa13.08□□□□□ -0.32
COL5A1-207ENST00000469093 F8VP50 259 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 TRIM66O15016 1216 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 OLFM2O95897 454 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 FAM163BP0C2L3 166 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 ANXA13P27216 316 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 SLC6A11P48066 632 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 PPP3CCP48454 512 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 NOP14P78316 857 aaKnown RBP13.07□□□□□ -0.32
COL5A1-207ENST00000469093 DHCR24Q15392 516 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 CRY1Q16526 586 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 PMS2CLQ68D20 193 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 ANO7Q6IWH7 933 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 TRAPPC11Q7Z392 1133 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 FILIP1Q7Z7B0 1213 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 CCDC33Q8N5R6 958 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 KIAA1958Q8N8K9 716 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 CNOT6LQ96LI5 555 aaKnown RBP13.07□□□□□ -0.32
COL5A1-207ENST00000469093 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 TPSD1Q9BZJ3 242 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 KIAA1586Q9HCI6 787 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 HSPBP1Q9NZL4 362 aa13.07□□□□□ -0.32
COL5A1-207ENST00000469093 CACNA1GO43497 2377 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 A0A0A0MRY4 1105 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 LNP1A1A4G5 178 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 GIPC1O14908 333 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 TGFB1I1O43294 461 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 TACC1O75410 805 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 CYP17A1P05093 508 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-207ENST00000469093 HNRNPLP14866 589 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL5A1-207ENST00000469093 PTPN1P18031 435 aaKnown RBP13.06□□□□□ -0.32
COL5A1-207ENST00000469093 BCKDHBP21953 392 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 MESP2Q0VG99 397 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 TAF10Q12962 218 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 MDH1BQ5I0G3 518 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 PSAPL1Q6NUJ1 521 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 RHBDF2Q6PJF5 856 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 HS2ST1Q7LGA3 356 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 MDGA1Q8NFP4 955 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 OR6B3Q8NGW1 331 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 ZNF507Q8TCN5 953 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 TRIM9Q9C026 710 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 SNX25Q9H3E2 840 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 KBTBD4Q9NVX7 518 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 SMPD4Q9NXE4 827 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 EHD2Q9NZN4 543 aa13.06□□□□□ -0.32
COL5A1-207ENST00000469093 MMP17Q9ULZ9 603 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms