RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 STOX1Q6ZVD7 989 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ANKS3Q6ZW76 656 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CYB5R4Q7L1T6 521 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 MIGA2Q7L4E1 593 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 HAUS6Q7Z4H7 955 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 SLFN11Q7Z7L1 901 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 RASSF3Q86WH2 238 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ECHDC2Q86YB7 292 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 C2CD5Q86YS7 1000 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 KLHL7Q8IXQ5 586 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 MB21D2Q8IYB1 491 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ARL10Q8N8L6 244 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 PDPRQ8NCN5 879 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 GIMAP8Q8ND71 665 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TNIP2Q8NFZ5 429 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 OR6Y1Q8NGX8 325 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 MDM1Q8TC05 714 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CALML6Q8TD86 181 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 DDX54Q8TDD1 881 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 AFG1LQ8WV93 481 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 RAPGEF4Q8WZA2 1011 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF75CPQ92670 426 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 EAF2Q96CJ1 260 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 APBA2Q99767 749 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CDK19Q9BWU1 502 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TDRD1Q9BXT4 1180 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 OSBPL8Q9BZF1 889 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 NIF3L1Q9GZT8 377 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CSRNP2Q9H175 543 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 MYLK2Q9H1R3 596 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TPK1Q9H3S4 243 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 AZI2Q9H6S1 392 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CNNM2Q9H8M5 875 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 NCOA5Q9HCD5 579 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 MAGEE1Q9HCI5 957 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CYP4F12Q9HCS2 524 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 INIPQ9NRY2 104 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TCP11L1Q9NUJ3 509 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ARMC1Q9NVT9 282 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 IGSF9Q9P2J2 1179 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ZMAT5Q9UDW3 170 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ASAP1Q9ULH1 1129 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 STX8Q9UNK0 236 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 IFT52Q9Y366 437 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TRIM17Q9Y577 477 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CD2APQ9Y5K6 639 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 C4AP0C0L4 1744 aa5.09□□□□□ -1.6
SF3B1-207ENST00000468925 C4BP0C0L5 1744 aa5.09□□□□□ -1.6
SF3B1-207ENST00000468925 DDX60Q8IY21 1712 aaKnown RBP5.09□□□□□ -1.6
SF3B1-207ENST00000468925 SLIT3O75094 1523 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF609O15014 1411 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 USP6P35125 1406 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 C10orf71Q711Q0 1435 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 MAP3K19Q56UN5 1328 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 SYNGAP1Q96PV0 1343 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF532Q9HCE3 1301 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 FAM95CA0A1B0GW59 222 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM120BA0PK00 339 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 FUOMA2VDF0 154 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 FAM47DPA6NHR8 397 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 A8MUI8 341 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 FADS2P1A8MWK0 482 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 FAM25EA8MYX2 175 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 MIF4GDA9UHW6 222 aaKnown RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RASA4BC9J798 803 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 M0QX08 132 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 GRM8O00222 908 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 IFRD1O00458 451 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CASQ2O14958 399 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 DAPK3O43293 454 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RIPK2O43353 540 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RASA4O43374 803 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 KLF4O43474 513 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ZC3H11AO75152 810 aaKnown RBP eCLIP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TBX10O75333 385 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 HAUS5O94927 633 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 KRT75O95678 551 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 WNT11O96014 354 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CTSBP07858 339 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 OCM2P0CE71 109 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 OCMP0CE72 109 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 GSTT2P0CG29 244 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 GSTT2BP0CG30 244 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ANPEPP15144 967 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 VCLP18206 1134 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CDKN1CP49918 316 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ACTR3P61158 418 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ESRRGP62508 458 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ATP2C1P98194 919 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CYP27A1Q02318 531 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 PPARAQ07869 468 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM62Q0P6H9 643 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 HSPA14Q0VDF9 509 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 IKQ13123 557 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CALCOCO2Q13137 446 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ORC2Q13416 577 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 MOGSQ13724 837 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RAB33AQ14088 237 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 PDK4Q16654 411 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RGS21Q2M5E4 152 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms