RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PPP1R2P3Q6NXS1 205 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 FAM171BQ6P995 826 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 MTERF4Q7Z6M4 381 aaKnown RBP8.71□□□□□ -1.01
BRCA1-208ENST00000468300 DEFB128Q7Z7B8 93 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 ANKRD52Q8NB46 1076 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 ACTRT1Q8TDG2 376 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 BCL7CQ8WUZ0 217 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-208ENST00000468300 RAB6CQ9H0N0 254 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 RC3H2Q9HBD1 1191 aaKnown RBP8.71□□□□□ -1.01
BRCA1-208ENST00000468300 TTC7AQ9ULT0 858 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-208ENST00000468300 NR2E1Q9Y466 385 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM110-MUSTN1A8MSY1 372 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 PIK3R2O00459 728 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 KCNK3O14649 394 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 RABGGTBP53611 331 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 ITIH3Q06033 890 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 ZNF268Q14587 947 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-208ENST00000468300 TAF5Q15542 800 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 GLB1LQ6UWU2 654 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 FAM183BPQ6ZVS7 135 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 TMEM173Q86WV6 379 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-208ENST00000468300 TMEM86AQ8N2M4 240 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 CEP112Q8N8E3 955 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 NIPA2Q8N8Q9 360 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 ZMIZ2Q8NF64 920 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 CLEC4CQ8WTT0 213 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 MCEEQ96PE7 176 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 HERPUD2Q9BSE4 406 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 SNX25Q9H3E2 840 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 HHLA1C9JL84 531 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 F8VP50 259 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 PAPSS1O43252 624 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-208ENST00000468300 PLA2G4AP47712 749 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 C2orf54Q08AI8 447 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 STILQ15468 1287 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 TXNRD3NBQ6F5E7 133 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 CYP4V2Q6ZWL3 525 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-208ENST00000468300 SPATA4Q8NEY3 305 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 STK32AQ8WU08 396 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 C18orf8Q96DM3 657 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 PCED1BQ96HM7 432 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 RHOBTB2Q9BYZ6 727 aa8.71□□□□□ -1.02
BRCA1-208ENST00000468300 KIAA0355O15063 1070 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 TIMP1P01033 207 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 PYGMP11217 842 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 ADORA2BP29275 332 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 MAN1A1P33908 653 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 FLT3P36888 993 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 ABL2P42684 1182 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 RGS7P49802 495 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 SIX1Q15475 284 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 MDH1BQ5I0G3 518 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 LIN9Q5TKA1 542 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 CLEC20AQ6ZU45 233 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 C16orf59Q7L2K0 433 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 C11orf84Q9BUA3 381 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 RBM12Q9NTZ6 932 aaKnown RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 CALCOCO1Q9P1Z2 691 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 PCDHB7Q9Y5E2 793 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 SCINQ9Y6U3 715 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 LHX1P48742 406 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 PLCB3Q01970 1234 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 BST2Q10589 180 aaKnown RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 ZNF211Q13398 564 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 CC2D1AQ6P1N0 951 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 BHLHA9Q7RTU4 235 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 TMCO2Q7Z6W1 182 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 EMC1Q8N766 993 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 SPATA18Q8TC71 538 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 ZNF689Q96CS4 500 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 PBKQ96KB5 322 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 PNKPQ96T60 521 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 SMOQ99835 787 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 DUSP16Q9BY84 665 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 CWH43Q9H720 699 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 MRPL47Q9HD33 250 aaKnown RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 METTL5Q9NRN9 209 aaKnown RBP8.7□□□□□ -1.02
BRCA1-208ENST00000468300 TMEM39AQ9NV64 488 aa8.7□□□□□ -1.02
BRCA1-208ENST00000468300 TCRBV7S2A1N4TA0A589 114 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 DYNC1I1O14576 645 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 NRP1O14786 923 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 DGKIO75912 1065 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 FAM200BP0CF97 657 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 SLC11A1P49279 550 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 RNASE9P60153 205 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 ADCY1Q08828 1119 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 MRPL58Q14197 206 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 KCTD19Q17RG1 926 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CNKSR3Q6P9H4 555 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 DSTYKQ6XUX3 929 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 GPRIN1Q7Z2K8 1008 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 MYCBPAPQ8TBZ2 947 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 SYT15Q9BQS2 421 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 ACBD6Q9BR61 282 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 VN1R3Q9BXE9 311 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CARD9Q9H257 536 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CSNK1G1Q9HCP0 422 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms