RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 B3GNT5Q9BYG0 378 aa15.53■□□□□ 0.08
COMMD3-206ENST00000468179 NIF3L1Q9GZT8 377 aa15.53■□□□□ 0.08
COMMD3-206ENST00000468179 FAM124BQ9H5Z6 455 aaPredicted RBP15.53■□□□□ 0.08
COMMD3-206ENST00000468179 TRPC7Q9HCX4 862 aa15.53■□□□□ 0.08
COMMD3-206ENST00000468179 COMMD8Q9NX08 183 aa15.53■□□□□ 0.08
COMMD3-206ENST00000468179 ARMCX3Q9UH62 379 aaPredicted RBP15.53■□□□□ 0.08
COMMD3-206ENST00000468179 MAN1B1Q9UKM7 699 aa15.53■□□□□ 0.08
COMMD3-206ENST00000468179 PIAS3Q9Y6X2 628 aa15.53■□□□□ 0.08
COMMD3-206ENST00000468179 ZDBF2Q9HCK1 2354 aa15.53■□□□□ 0.08
COMMD3-206ENST00000468179 GADD45BO75293 160 aaPredicted RBP15.52■□□□□ 0.08
COMMD3-206ENST00000468179 ASPAP45381 313 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 RPS9P46781 194 aaKnown RBP15.52■□□□□ 0.08
COMMD3-206ENST00000468179 NDST1P52848 882 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 AMPD2Q01433 879 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 ANGPT1Q15389 498 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 FOXR2Q6PJQ5 311 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 ACOT1Q86TX2 421 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 GPIHBP1Q8IV16 184 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 C1orf210Q8IVY1 113 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 ZC3H3Q8IXZ2 948 aaKnown RBP15.52■□□□□ 0.08
COMMD3-206ENST00000468179 NUP93Q8N1F7 819 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 PDZD8Q8NEN9 1154 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 ERCC4Q92889 916 aaPredicted RBP15.52■□□□□ 0.08
COMMD3-206ENST00000468179 EXOC4Q96A65 974 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 RSPRY1Q96DX4 576 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 IER2Q9BTL4 223 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 NT5C1AQ9BXI3 368 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 ZNF518BQ9C0D4 1074 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 DMAP1Q9NPF5 467 aaPredicted RBP15.52■□□□□ 0.08
COMMD3-206ENST00000468179 RAB20Q9NX57 234 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 DLGAP2Q9P1A6 1054 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 NME7Q9Y5B8 376 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 KMT2EQ8IZD2 1858 aa15.52■□□□□ 0.08
COMMD3-206ENST00000468179 ARNTLO00327 626 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 PRAMEF12O95522 483 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 CKMP06732 381 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 HDCP19113 662 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 CD72P21854 359 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 YWHAQP27348 245 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 INCA1Q0VD86 236 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 DCAF17Q5H9S7 520 aaPredicted RBP15.51■□□□□ 0.07
COMMD3-206ENST00000468179 ISM2Q6H9L7 571 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 SPOPLQ6IQ16 392 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 FILIP1Q7Z7B0 1213 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 FAM35AQ86V20 835 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 RALGPS2Q86X27 583 aaPredicted RBP15.51■□□□□ 0.07
COMMD3-206ENST00000468179 TRIML1Q8N9V2 468 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 STKLD1Q8NE28 680 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 OVCA2Q8WZ82 227 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 USP13Q92995 863 aaPredicted RBP15.51■□□□□ 0.07
COMMD3-206ENST00000468179 CLDN23Q96B33 292 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 EEF2KMTQ96G04 330 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
COMMD3-206ENST00000468179 CLDN5O00501 218 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 LAMTOR5O43504 91 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 TADA3O75528 432 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 AP1G2O75843 785 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 FGFR1OPO95684 399 aaKnown RBP15.5■□□□□ 0.07
COMMD3-206ENST00000468179 GNA14O95837 355 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 TARSP26639 723 aaKnown RBP15.5■□□□□ 0.07
COMMD3-206ENST00000468179 CETN1Q12798 172 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 MORC3Q14149 939 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 PDGFRLQ15198 375 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 ITPRIPL2Q3MIP1 535 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 SMG9Q9H0W8 520 aaKnown RBP15.5■□□□□ 0.07
COMMD3-206ENST00000468179 GKN1Q9NS71 199 aa15.5■□□□□ 0.07
COMMD3-206ENST00000468179 SPATA6Q9NWH7 488 aaPredicted RBP15.5■□□□□ 0.07
COMMD3-206ENST00000468179 FAM200BP0CF97 657 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 MRE11P49959 708 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 PMS1P54277 932 aaKnown RBP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 YWHAEP62258 255 aaKnown RBP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 TAF10Q12962 218 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 LRRC32Q14392 662 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 PPP2R5DQ14738 602 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 CCDC40Q4G0X9 1142 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 KLHL10Q6JEL2 608 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 ALYREFQ86V81 257 aaKnown RBP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 KIAA1958Q8N8K9 716 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 NELFBQ8WX92 580 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 LRRC3BQ96PB8 259 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 HNRNPABQ99729 332 aaKnown RBP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 FBXO44Q9H4M3 255 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 APOBEC3GQ9HC16 384 aaKnown RBP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 KRT82Q9NSB4 513 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 GCNT4Q9P109 453 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 NDRG2Q9UN36 371 aaKnown RBP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 MTF2Q9Y483 593 aaPredicted RBP15.49■□□□□ 0.07
COMMD3-206ENST00000468179 NCANO14594 1321 aa15.49■□□□□ 0.07
COMMD3-206ENST00000468179 TRIM49BA6NDI0 452 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 ZNF840PA6NDX5 716 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 PROB1E7EW31 1015 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 SPECC1L-ADORA2AF8WAN1 911 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 CILPO75339 1184 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 ABL1P00519 1130 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 TCF3P15923 654 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 NBL1P41271 181 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 USP46P62068 366 aa15.48■□□□□ 0.07
COMMD3-206ENST00000468179 NR1H3Q13133 447 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms