RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	DNAJC12	Q9UKB3	198 aa		12.83	□□□□□ -0.36
CTNS-205	ENST00000467663	PIEZO1	Q92508	2521 aa		12.83	□□□□□ -0.36
CTNS-205	ENST00000467663	GOLGA6L9	A6NEM1	432 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	LRRC53	A6NM62	1247 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663		H0Y858	1186 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	NRG2	O14511	850 aa	Predicted RBP	12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	IPO7	O95373	1038 aa	Known RBP	12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	ASS1	P00966	412 aa	Known RBP	12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	ITGB3	P05106	788 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	FCAR	P24071	287 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	POLR2B	P30876	1174 aa	Known RBP	12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	SOX5	P35711	763 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	ALDH1A3	P47895	512 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	EPHB3	P54753	998 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	STARD6	P59095	220 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	BPIFB4	P59827	614 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	RBP5	P82980	135 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	SMARCB1	Q12824	385 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	FAM78A	Q5JUQ0	283 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	WSCD1	Q658N2	575 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	TMC8	Q8IU68	726 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	TMEM139	Q8IV31	216 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	CCDC105	Q8IYK2	499 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	THEM5	Q8N1Q8	247 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	LRRC52	Q8N7C0	313 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	ATAD1	Q8NBU5	361 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	KIAA1524	Q8TCG1	905 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	ASB16	Q96NS5	453 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	PHOX2B	Q99453	314 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	PLA2G2F	Q9BZM2	168 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	KCNF1	Q9H3M0	494 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	TBC1D17	Q9HA65	648 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	NLRC4	Q9NPP4	1024 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	LUC7L	Q9NQ29	371 aa	Known RBP	12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	AGAP1	Q9UPQ3	857 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	SLC27A5	Q9Y2P5	690 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	ASB3	Q9Y575	518 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	FHOD1	Q9Y613	1164 aa		12.82	□□□□□ -0.36
CTNS-205	ENST00000467663	ESPN	B1AK53	854 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	EPHB6	O15197	1021 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	ZSCAN12	O43309	604 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	TUBB4A	P04350	444 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	FAM163B	P0C2L3	166 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	MYL4	P12829	197 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	TUFM	P49411	452 aa	Known RBP	12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	KRT83	P78385	493 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	PFKP	Q01813	784 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	LRMP	Q12912	555 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	MYO1E	Q12965	1108 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	RAPGEF1	Q13905	1077 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	DRAP1	Q14919	205 aa	Predicted RBP	12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	ASIC2	Q16515	512 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	SLC39A12	Q504Y0	691 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	SCARA3	Q6AZY7	606 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	TANGO2	Q6ICL3	276 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	LRRTM3	Q86VH5	581 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	PPM1K	Q8N3J5	372 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	TTC9B	Q8N6N2	239 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	OR5B17	Q8NGF7	314 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	C2orf15	Q8WU43	125 aa	Known RBP	12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	SHC3	Q92529	594 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	SEMA4D	Q92854	862 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	PSMG2	Q969U7	264 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	SHD	Q96IW2	340 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	CCDC42	Q96M95	316 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	ZSWIM3	Q96MP5	696 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	DDX23	Q9BUQ8	820 aa	Known RBP	12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	MTMR12	Q9C0I1	747 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	GPR88	Q9GZN0	384 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	DNAI2	Q9GZS0	605 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	TRPV4	Q9HBA0	871 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	GDAP2	Q9NXN4	497 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	SIX4	Q9UIU6	781 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	SCN1A	P35498	2009 aa		12.81	□□□□□ -0.36
CTNS-205	ENST00000467663	CACNA1H	O95180	2353 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	WDFY4	Q6ZS81	3184 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663		F8VZ95	297 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	RNF225	M0QZC1	329 aa	Predicted RBP	12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	STK25	O00506	426 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	VNN1	O95497	513 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	NOP14	P78316	857 aa	Known RBP	12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	PRKCQ	Q04759	706 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	KLHL30	Q0D2K2	578 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	SLC44A4	Q53GD3	710 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	C10orf76	Q5T2E6	689 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	WDR59	Q6PJI9	974 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	PDCL2	Q8N4E4	241 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	DTWD2	Q8NBA8	298 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	SHKBP1	Q8TBC3	707 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	SPATA18	Q8TC71	538 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	SPPL2B	Q8TCT7	592 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	ATOH1	Q92858	354 aa	Predicted RBP	12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	SMARCD2	Q92925	531 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	FAM84A	Q96KN4	292 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	NIF3L1	Q9GZT8	377 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	CYP3A43	Q9HB55	503 aa		12.8	□□□□□ -0.36
CTNS-205	ENST00000467663	ZFP14	Q9HCL3	533 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms