RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 GREB1Q4ZG55 1949 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 TRAV19A0A0A6YYK7 116 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 ANTXRLA6NF34 631 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 TRDMT1O14717 391 aaKnown RBP15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 C4BPAP04003 597 aaKnown RBP15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 CKMP06732 381 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 USP17L7P0C7H9 530 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 GJA4P35212 333 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 GALK1P51570 392 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 NDUFA8P51970 172 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 TNNC1P63316 161 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 TRPC3Q13507 836 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 C1orf220Q5T0J3 134 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 DENND5BQ6ZUT9 1274 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 SH3RF2Q8TEC5 729 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 OSCP1Q8WVF1 389 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 TTLL2Q9BWV7 592 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 RNF38Q9H0F5 515 aa15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 CGNQ9P2M7 1197 aaKnown RBP15.75■□□□□ 0.11
ATPAF2-204ENST00000467560 ANAPC1Q9H1A4 1944 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 ZNF840PA6NDX5 716 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 A8MXQ7 604 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 HDCP19113 662 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 PXNP49023 591 aaPredicted RBP15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 NRLP54845 237 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 PDGFRLQ15198 375 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 MAPRE1Q15691 268 aaKnown RBP15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 EML3Q32P44 896 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 CC2D1AQ6P1N0 951 aaPredicted RBP15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 SCARA5Q6ZMJ2 495 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 PAQR9Q6ZVX9 377 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 SYNPOQ8N3V7 929 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 B3GALNT2Q8NCR0 500 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 SPATA32Q96LK8 384 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 C8orf48Q96LL4 319 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 GOLPH3LQ9H4A5 285 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 ECT2Q9H8V3 914 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 EXOC1Q9NV70 894 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 DUS2Q9NX74 493 aaKnown RBP15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 ARHGAP26Q9UNA1 814 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 SDK1Q7Z5N4 2213 aa15.74■□□□□ 0.11
ATPAF2-204ENST00000467560 ZNF638Q14966 1978 aaKnown RBP15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 ATG2BQ96BY7 2078 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 FAM237AA0A1B0GTK4 181 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 SCAMP3O14828 347 aaKnown RBP15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 PHACTR2O75167 634 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 NR3C1P04150 777 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 RPN1P04843 607 aaKnown RBP15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 FAM163BP0C2L3 166 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 ATICP31939 592 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 NOP14P78316 857 aaKnown RBP15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 TAF10Q12962 218 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 ORC1Q13415 861 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 BIRC3Q13489 604 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 NCOA4Q13772 614 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 PPP2R5DQ14738 602 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 RSPO4Q2I0M5 234 aaPredicted RBP15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 PRR23BQ6ZRT6 265 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 LONP2Q86WA8 852 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 GOLGA5Q8TBA6 731 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 TMEM174Q8WUU8 243 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 SYAP1Q96A49 352 aaPredicted RBP15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 KCNK16Q96T55 309 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 VRTNQ9H8Y1 702 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 DLL3Q9NYJ7 618 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 HMGXB4Q9UGU5 601 aa15.73■□□□□ 0.11
ATPAF2-204ENST00000467560 LEFTY2O00292 366 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 PDXKO00764 312 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 TRIM66O15016 1216 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 RNF40O75150 1001 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 ANXA13P27216 316 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 SPEM2Q0P670 501 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 GRSF1Q12849 480 aaKnown RBP eCLIP15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 PSMD2Q13200 908 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 SIM2Q14190 667 aaPredicted RBP15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 KCNB1Q14721 858 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 GAB4Q2WGN9 574 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 ZNF699Q32M78 642 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 SPOPLQ6IQ16 392 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 FSIP1Q8NA03 581 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 P2RY13Q9BPV8 354 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.72■□□□□ 0.119e-15■■■■■ 186.3
ATPAF2-204ENST00000467560 SMPD4Q9NXE4 827 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 MAPK8IP1Q9UQF2 711 aa15.72■□□□□ 0.11
ATPAF2-204ENST00000467560 MED19A0JLT2 244 aaPredicted RBP15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 OLFM2O95897 454 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 SYKP43405 635 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 IFNAR2P48551 515 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 PGFP49763 221 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 KRT85P78386 507 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 DPYDQ12882 1025 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 IFRD2Q12894 506 aaPredicted RBP15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 ZACNQ401N2 412 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 SV2AQ7L0J3 742 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 ERMP1Q7Z2K6 904 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 CPA6Q8N4T0 437 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 SCAMP5Q8TAC9 235 aa15.71■□□□□ 0.11
ATPAF2-204ENST00000467560 CEP295NLQ96MC4 621 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms