RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 LRTOMTQ8WZ04 291 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 FCRL4Q96PJ5 515 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 DLL3Q9NYJ7 618 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 A0A087WWL8 130 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 ISM1B1AKI9 464 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 H0YIZ8 118 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 PPP6CO00743 305 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 PRC1O43663 620 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 MOSPD3O75425 235 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 THP07101 528 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 MPGP29372 298 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 ETFDHQ16134 617 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 PRAMEF17Q5VTA0 474 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 WDR53Q7Z5U6 358 aaPredicted RBP5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 FANCBQ8NB91 859 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 TTC17Q96AE7 1141 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 MSLNLQ96KJ4 702 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 ZNF48Q96MX3 618 aaPredicted RBP5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 HESX1Q9UBX0 185 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 CPA4Q9UI42 421 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 SH2B3Q9UQQ2 575 aa5.51□□□□□ -1.53
PRPF40A-205ENST00000467114 A0A1W2PPL8 197 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 APAF1O14727 1248 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 SLC16A3O15427 465 aaKnown RBP5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 TLR5O60602 858 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 ONECUT2O95948 504 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 TUBB4AP04350 444 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 GNAI2P04899 355 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 IL6RP08887 468 aaPredicted RBP5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 PHKG2P15735 406 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 PEX2P28328 305 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 EEFSECP57772 596 aaKnown RBP5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 FMO1Q01740 532 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 KIAA0753Q2KHM9 967 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 FAM160B1Q5W0V3 765 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 ICE2Q659A1 982 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 CCSAPQ6IQ19 270 aaPredicted RBP5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 DARS2Q6PI48 645 aaKnown RBP5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 TMEM108Q6UXF1 575 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 CCDC149Q6ZUS6 474 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 MAVSQ7Z434 540 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 SESTD1Q86VW0 696 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 PJA1Q8NG27 643 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 ZBTB9Q96C00 473 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 QTRT1Q9BXR0 403 aaKnown RBP5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 KRTAP1-5Q9BYS1 174 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 BTBD1Q9H0C5 482 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 COL20A1Q9P218 1284 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 PLEKHM1Q9Y4G2 1056 aa5.5□□□□□ -1.53
PRPF40A-205ENST00000467114 CFAP69A5D8W1 941 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 PRRT4C9JH25 899 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 M0QYG6 137 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 ADAMTS3O15072 1205 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 UNC5CO95185 931 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 IGKV2-30P06310 120 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 CYP2D6P10635 497 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 CYP2C18P33260 490 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 LIPAP38571 399 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 SLC11A2P49281 568 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 HTRA4P83105 476 aaPredicted RBP5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 CTBP1Q13363 440 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 CNGA2Q16280 664 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 SUPT20HL1Q3ZLR7 823 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 CEP78Q5JTW2 689 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 SLC9A4Q6AI14 798 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 SLC18B1Q6NT16 456 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 MESP1Q9BRJ9 268 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 NAA15Q9BXJ9 866 aaKnown RBP5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 CHST12Q9NRB3 414 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 CPNE7Q9UBL6 633 aa5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.49□□□□□ -1.53
PRPF40A-205ENST00000467114 ZNF521Q96K83 1311 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 ANO9A1A5B4 782 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 TRIM43BA6NCK2 446 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 QSOX1O00391 747 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 BTN3A1O00481 513 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 CAND2O75155 1236 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 BMP15O95972 392 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 VIPR2P41587 438 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 TM4SF4P48230 202 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 ZNF134P52741 427 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 SUMO3P55854 103 aaPredicted RBP5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 MAP9Q49MG5 647 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 TREML2Q5T2D2 321 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 FAM46DQ8NEK8 389 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 DENND1AQ8TEH3 1009 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 PHKBQ93100 1093 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 TRIM43Q96BQ3 446 aaPredicted RBP5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 SLC46A1Q96NT5 459 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 DUSP22Q9NRW4 184 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 TPCN1Q9ULQ1 816 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 PCDHGB6Q9Y5F9 930 aa5.48□□□□□ -1.53
PRPF40A-205ENST00000467114 SMIM22K7EJ46 135 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 IKBKBO14920 756 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 SFPQP23246 707 aaKnown RBP eCLIP5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 SLC7A1P30825 629 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 UCP3P55916 312 aa5.47□□□□□ -1.53
PRPF40A-205ENST00000467114 WNT3P56703 355 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms