RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 WISP1O95388 367 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 LARGE1O95461 756 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 VNN2O95498 520 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 C6P13671 934 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 CD44P16070 742 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 WARSP23381 471 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 AFF3P51826 1226 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 SRSF5Q13243 272 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 CAMK2BQ13554 666 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 UAP1L1Q3KQV9 507 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 MGAT5BQ3V5L5 792 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 DIEXFQ68CQ4 756 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 FAM171BQ6P995 826 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 CENPQQ7L2Z9 268 aaPredicted RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 IGSF22Q8N9C0 903 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 ZNF579Q8NAF0 562 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 ZNF668Q96K58 619 aaPredicted RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 MAGEC2Q9UBF1 373 aaPredicted RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 SEPT3Q9UH03 358 aa6.11□□□□□ -1.43
CXXC4-202ENST00000466963 CPSF3Q9UKF6 684 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
CXXC4-202ENST00000466963 A0A0B4J269 797 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 METTL12A8MUP2 240 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 PRAMEF12O95522 483 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ITGB2P05107 769 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 GP1BAP07359 652 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 GARTP22102 1010 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 RXRGP48443 463 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 DUSP3P51452 185 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ZNF131P52739 623 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 RPL6Q02878 288 aaKnown RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 TNK2Q07912 1038 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ARID5BQ14865 1188 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 PLEKHG6Q3KR16 790 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 TDRD10Q5VZ19 366 aaKnown RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 SPATA2LQ8IUW3 424 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ETFBKMTQ8IXQ9 262 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ARHGAP18Q8N392 663 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 PHTF2Q8N3S3 785 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 SYT2Q8N9I0 419 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 FGF11Q92914 225 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ERLEC1Q96DZ1 483 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 FBXO44Q9H4M3 255 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 SNX14Q9Y5W7 946 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 THADAQ6YHU6 1953 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 GABRDO14764 452 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 RFPL3O75679 317 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 KLF8O95600 359 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 CFIP05156 583 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 PRKCSHP14314 528 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 HOXC13P31276 330 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ATICP31939 592 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 LIG4P49917 911 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 CCR5P51681 352 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ARPP19P56211 112 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 RBP5P82980 135 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 SOX4Q06945 474 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 CCDC15Q0P6D6 951 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 DHCR24Q15392 516 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 CLPPQ16740 277 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 LONRF3Q496Y0 759 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 B4GALNT3Q6L9W6 998 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 PIK3AP1Q6ZUJ8 805 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 C1orf186Q6ZWK4 172 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 HTR3DQ70Z44 454 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 DCP2Q8IU60 420 aaKnown RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 RASEFQ8IZ41 740 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 IL17RCQ8NAC3 791 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 TMEM161BQ8NDZ6 487 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 MDGA1Q8NFP4 955 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ADNPQ9H2P0 1102 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ARHGEF4Q9NR80 690 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 FTSJ1Q9UET6 329 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 MBD1Q9UIS9 605 aaPredicted RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 FBXO10Q9UK96 956 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 CEP250Q9BV73 2442 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 UBE4BO95155 1302 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 FAM92AA1XBS5 289 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 B8ZZF3 427 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 CYB561D2O14569 222 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ATF6P18850 670 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 HDCP19113 662 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 CCT6AP40227 531 aaKnown RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 PCBP4P57723 403 aaKnown RBP6.1□□□□□ -1.43
CXXC4-202ENST00000466963 KANSL1Q7Z3B3 1105 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 TERB1Q8NA31 727 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 SH3RF2Q8TEC5 729 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 HASPINQ8TF76 798 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 PKMYT1Q99640 499 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 TUBD1Q9UJT1 453 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 TAF6LQ9Y6J9 622 aa6.1□□□□□ -1.43
CXXC4-202ENST00000466963 ZNF638Q14966 1978 aaKnown RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 MEI4A8MW99 385 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 KPNA7A9QM74 516 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 F8W810 466 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 GIPC1O14908 333 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 BCAT2O15382 392 aaPredicted RBP6.09□□□□□ -1.43
CXXC4-202ENST00000466963 SLC7A4O43246 635 aa6.09□□□□□ -1.43
CXXC4-202ENST00000466963 CYP17A1P05093 508 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms