RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 CAND1Q86VP6 1230 aaKnown RBP4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 GRAMD1CQ8IYS0 662 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 IZUMO1Q8IYV9 350 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 CGRRF1Q99675 332 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 MESP1Q9BRJ9 268 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 ARMT1Q9H993 441 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 PCDH12Q9NPG4 1184 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 PIH1D1Q9NWS0 290 aaKnown RBP4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 TRNAU1APQ9NX07 287 aaKnown RBP4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 KLHL13Q9P2N7 655 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 CPA4Q9UI42 421 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 COL4A3BPQ9Y5P4 624 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 ADORA2AP29274 412 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 DGKEP52429 567 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 E2F1Q01094 437 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 FGL2Q14314 439 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 ZNF260Q3ZCT1 412 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 Q4G0T1 1027 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 ATAT1Q5SQI0 421 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 ZNF813Q6ZN06 617 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 GAS2L3Q86XJ1 694 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 ZNF280BQ86YH2 543 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 ABRAQ8N0Z2 381 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 CELF5Q8N6W0 485 aaKnown RBP4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 NANOGP1Q8N7R0 232 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 ADAMTS18Q8TE60 1221 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 RSPRY1Q96DX4 576 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 FYTTD1Q96QD9 318 aaKnown RBP4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 SCAF8Q9UPN6 1271 aaKnown RBP4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 ANKRD6Q9Y2G4 727 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 AFG3L2Q9Y4W6 797 aa4.9□□□□□ -1.63
CHMP2B-202ENST00000466696 A0A088AWK7 358 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 MYMKA6NI61 221 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 BTBD19C9JJ37 291 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 SOCS2O14508 198 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 DSCR3O14972 297 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 INSIG1O15503 277 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 OFD1O75665 1012 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 FGBP02675 491 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 KCNA3P22001 575 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 ATP5F1P24539 256 aaPredicted RBP4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 CYP1B1Q16678 543 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 FAM187BQ17R55 369 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 C4orf46Q504U0 113 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 BRDTQ58F21 947 aaPredicted RBP4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 LMBRD2Q68DH5 695 aaPredicted RBP4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 SFTPA1Q8IWL2 248 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 SIRT6Q8N6T7 355 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 PLBD2Q8NHP8 589 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 ZCRB1Q8TBF4 217 aaKnown RBP4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 MRGPRX1Q96LB2 322 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 ZSCAN32Q9NX65 697 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 AMFRQ9UKV5 643 aa4.89□□□□□ -1.63
CHMP2B-202ENST00000466696 A0A087WWL8 130 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 TCRBV5S1A1TA0A578 114 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 TMEM232C9JQI7 657 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 AP4M1O00189 453 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 PSMD9O00233 223 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 FCHO1O14526 889 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 SNHG28P0DPA3 235 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 FPR3P25089 353 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 ALDH5A1P51649 535 aaPredicted RBP4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 PRKAG1P54619 331 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 RAB1AP62820 205 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 ZNF268Q14587 947 aaPredicted RBP4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 ZIK1Q3SY52 487 aaPredicted RBP4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 RNASE12Q5GAN4 147 aaKnown RBP4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 MEX3CQ5U5Q3 659 aaKnown RBP4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 SLC15A4Q8N697 577 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 DNAJC5GQ8N7S2 189 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 C16orf52Q8NHV5 167 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 KBTBD7Q8WVZ9 684 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 CUL5Q93034 780 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 COQ8BQ96D53 544 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 ZC3H10Q96K80 434 aaKnown RBP4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 PRR25Q96S07 402 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 P2RX7Q99572 595 aaKnown RBP4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 IP6K2Q9UHH9 426 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 SNX14Q9Y5W7 946 aa4.88□□□□□ -1.63
CHMP2B-202ENST00000466696 GCATO75600 419 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 FGAP02671 866 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 A1BGP04217 495 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 PF4V1P10720 104 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 PHKG2P15735 406 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 NEK2P51955 445 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 LRRC41Q15345 812 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 TWIST1Q15672 202 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 LY6KQ17RY6 165 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 PLA1AQ53H76 456 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 IFIT1BQ5T764 474 aaKnown RBP4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 SHC4Q6S5L8 630 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 ZNF783Q6ZMS7 281 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 BCDIN3DQ7Z5W3 292 aaKnown RBP4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 RAB11FIP4Q86YS3 637 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 CCDC17Q96LX7 622 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 MMS19Q96T76 1030 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 TRIM54Q9BYV2 358 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 AASDHPPTQ9NRN7 309 aa4.87□□□□□ -1.63
CHMP2B-202ENST00000466696 VNN1O95497 513 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms