RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TBX2Q13207 712 aaPredicted RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 RARS2Q5T160 578 aaKnown RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 CES5AQ6NT32 575 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 TMC5Q6UXY8 1006 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 TMC6Q7Z403 805 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 IRF2BP2Q7Z5L9 587 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 C12orf76Q8N812 135 aaPredicted RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 LEMD2Q8NC56 503 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 SMG7Q92540 1137 aaKnown RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 TRMT2BQ96GJ1 504 aaKnown RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 ZNF512Q96ME7 567 aaPredicted RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 KCNK16Q96T55 309 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 LHX5Q9H2C1 402 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 AVENQ9NQS1 362 aaPredicted RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 COMMD8Q9NX08 183 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 EHD2Q9NZN4 543 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 NOCTQ9UK39 431 aaKnown RBP16.92■□□□□ 0.3
GPC1-207ENST00000466624 MYO16Q9Y6X6 1858 aa16.92■□□□□ 0.3
GPC1-207ENST00000466624 DOCK6Q96HP0 2047 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 HHLA1C9JL84 531 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 M0QYV0 167 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 TNFRSF10BO14763 440 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 BEST1O76090 585 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 ADCY5O95622 1261 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 CALCAP01258 141 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 PTPN2P17706 415 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 HNRNPH3P31942 346 aaKnown RBP16.91■□□□□ 0.3
GPC1-207ENST00000466624 KRT9P35527 623 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 EPHA5P54756 1037 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 MAP3K7CLP57077 242 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 CDR2Q01850 454 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 PDE4CQ08493 712 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 ASIC2Q16515 512 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 NOP9Q86U38 636 aaKnown RBP16.91■□□□□ 0.3
GPC1-207ENST00000466624 STK32AQ8WU08 396 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 MYRFLQ96LU7 910 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
GPC1-207ENST00000466624 SLC38A8A6NNN8 435 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 RTN3O95197 1032 aaPredicted RBP16.9■□□□□ 0.3
GPC1-207ENST00000466624 FGF19O95750 216 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 HMGA1P17096 107 aaKnown RBP16.9■□□□□ 0.3
GPC1-207ENST00000466624 KCNA5P22460 613 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 CDH5P33151 784 aaPredicted RBP16.9■□□□□ 0.3
GPC1-207ENST00000466624 MTHFRP42898 656 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 GPD2P43304 727 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
GPC1-207ENST00000466624 LEXMQ3ZCV2 418 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 DNAJB7Q7Z6W7 309 aaPredicted RBP16.9■□□□□ 0.3
GPC1-207ENST00000466624 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 NUP93Q8N1F7 819 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 SLC35F5Q8WV83 523 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 KCTD13Q8WZ19 329 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 HSFY1Q96LI6 401 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 RIPOR3Q96MK2 946 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 NECTIN4Q96NY8 510 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 DNAJC7Q99615 494 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 LRRC3Q9BY71 257 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 PIDD1Q9HB75 910 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 CYLDQ9NQC7 956 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 IL37Q9NZH6 218 aa16.9■□□□□ 0.3
GPC1-207ENST00000466624 UXTQ9UBK9 157 aaPredicted RBP16.9■□□□□ 0.3
GPC1-207ENST00000466624 BZW2Q9Y6E2 419 aaKnown RBP16.9■□□□□ 0.3
GPC1-207ENST00000466624 FAM92AA1XBS5 289 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 H3BQ06 376 aaPredicted RBP16.89■□□□□ 0.29
GPC1-207ENST00000466624 MFAP3LO75121 409 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 LSM8O95777 96 aaKnown RBP16.89■□□□□ 0.29
GPC1-207ENST00000466624 RPL34P49207 117 aaKnown RBP16.89■□□□□ 0.29
GPC1-207ENST00000466624 MRE11P49959 708 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 SLC5A3P53794 718 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 ARID5AQ03989 594 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 PUS10Q3MIT2 529 aaKnown RBP16.89■□□□□ 0.29
GPC1-207ENST00000466624 RAB41Q5JT25 222 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 ATAT1Q5SQI0 421 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 SDHAF4Q5VUM1 108 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 E4F1Q66K89 784 aaPredicted RBP16.89■□□□□ 0.29
GPC1-207ENST00000466624 DENND1BQ6P3S1 775 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 TMC8Q8IU68 726 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 OR8K1Q8NGG5 319 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 UBA3Q8TBC4 463 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 GIPC2Q8TF65 315 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 SUSD6Q92537 303 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 SECISBP2LQ93073 1101 aaKnown RBP16.89■□□□□ 0.29
GPC1-207ENST00000466624 SYT11Q9BT88 431 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 FBXO44Q9H4M3 255 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 ASAH2Q9NR71 780 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 DNMT3BQ9UBC3 853 aaKnown RBP16.89■□□□□ 0.29
GPC1-207ENST00000466624 CEP83Q9Y592 693 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 ANAPC1Q9H1A4 1944 aa16.89■□□□□ 0.29
GPC1-207ENST00000466624 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
GPC1-207ENST00000466624 MBTPS2O43462 519 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 RHOP08100 348 aa16.88■□□□□ 0.29
GPC1-207ENST00000466624 CFHP08603 1231 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms