RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 UNKLQ9H9P5 680 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 HELLSQ9NRZ9 838 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 IGSF9Q9P2J2 1179 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 DNAJB11Q9UBS4 358 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 DKK2Q9UBU2 259 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 ST6GALNAC2Q9UJ37 374 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 HPSEQ9Y251 543 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 MRPS17Q9Y2R5 130 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 DTNAQ9Y4J8 743 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 TMEM200CA6NKL6 621 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 PIP5K1BO14986 540 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 PLSCR1O15162 318 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 CD3EAPO15446 510 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 CDKL5O76039 1030 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 NDUFA10O95299 355 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 NTSR2O95665 410 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 DHRS4L1P0CG22 281 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 GATA3P23771 443 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 DDX6P26196 483 aaKnown RBP eCLIP5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 PDE6CP51160 858 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 RENBPP51606 427 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 ITGA8P53708 1063 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 BCAT1P54687 386 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 JAG1P78504 1218 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 FAM189BP81408 668 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 R3HDM1Q15032 1099 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 TMTC4Q5T4D3 741 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 RAP1GAP2Q684P5 730 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 TANGO2Q6ICL3 276 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 RFX8Q6ZV50 586 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 DTX2Q86UW9 622 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 GATAD2AQ86YP4 633 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 C1orf210Q8IVY1 113 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 ZNF276Q8N554 614 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 CPEB3Q8NE35 698 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 DVL3Q92997 716 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 TBC1D20Q96BZ9 403 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 FAM136AQ96C01 138 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 RNF31Q96EP0 1072 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 C20orf173Q96LM9 149 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 ZNF768Q9H5H4 540 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 GOLGA2P5Q9HBQ8 144 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 SMPD4Q9NXE4 827 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 CEP72Q9P209 647 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 LRFN1Q9P244 771 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 SSX2IPQ9Y2D8 614 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 MAP3K2Q9Y2U5 619 aa5.13□□□□□ -1.59
CDC42BPA-211ENST00000466538 TRGV11A0A075B6L2 103 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 ACKR2O00590 384 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 SNX2O60749 519 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 ZFPL1O95159 310 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 SRGNP10124 158 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 NPPBP16860 134 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 EPHA3P29320 983 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 ARL4CP56559 192 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 PRKG1Q13976 671 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 KCNAB1Q14722 419 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 GEN1Q17RS7 908 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 PTCHD3Q3KNS1 767 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 RGS7BPQ6MZT1 257 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 ANKRD18AQ8IVF6 992 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 GALNT15Q8N3T1 639 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 IL17DQ8TAD2 202 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 DNAJB14Q8TBM8 379 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 IPO4Q8TEX9 1081 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 ABHD5Q8WTS1 349 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 SLC25A43Q8WUT9 341 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 TMEM125Q96AQ2 219 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 NUDT22Q9BRQ3 303 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 KATNAL1Q9BW62 490 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 C1QTNF3Q9BXJ4 246 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 INO80BQ9C086 356 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 GBA2Q9HCG7 927 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 HERC5Q9UII4 1024 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 FZD1Q9UP38 647 aa5.12□□□□□ -1.59
CDC42BPA-211ENST00000466538 SRGAP2O75044 1071 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 FAM20BO75063 409 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 CSF1RP07333 972 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 ITGA2BP08514 1039 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 UQCRC1P31930 480 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 GATMP50440 423 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 NXPH1P58417 271 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 TIAL1Q01085 375 aaKnown RBP eCLIP5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 GUCY1B3Q02153 619 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 ITIH3Q06033 890 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 ATP1A4Q13733 1029 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 VPS53Q5VIR6 699 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 RAB11FIP4Q86YS3 637 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 RASGRP3Q8IV61 690 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 ABRAQ8N0Z2 381 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 EXTL1Q92935 676 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 GCC1Q96CN9 775 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 PRPF18Q99633 342 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 TPSD1Q9BZJ3 242 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 TBCCD1Q9NVR7 557 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 PGAP2Q9UHJ9 254 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 GTF2A1LQ9UNN4 478 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 USP22Q9UPT9 525 aa5.11□□□□□ -1.59
CDC42BPA-211ENST00000466538 GPR52Q9Y2T5 361 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms