RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 SYT1P21579 422 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 WARSP23381 471 aaKnown RBP20.11■□□□□ 0.81
SRSF4-202ENST00000466448 GBP1P32455 592 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 PDE6CP51160 858 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 SEC13P55735 322 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 SHC2P98077 582 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 DUOXA2Q1HG44 320 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 GAB4Q2WGN9 574 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 C2orf27AQ580R0 203 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 CCDC65Q8IXS2 484 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 PDILTQ8N807 584 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 CCDC26Q8TAB7 109 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 HPS3Q969F9 1004 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 CEP295NLQ96MC4 621 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 USP28Q96RU2 1077 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 TTLL2Q9BWV7 592 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 TPSD1Q9BZJ3 242 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 HSPBP1Q9NZL4 362 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 TRPM5Q9NZQ8 1165 aa20.11■□□□□ 0.81
SRSF4-202ENST00000466448 MORC2Q9Y6X9 1032 aaPredicted RBP20.11■□□□□ 0.81
SRSF4-202ENST00000466448 ZNF840PA6NDX5 716 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 PFKLP17858 780 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 ANXA13P27216 316 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 HOXD13P35453 343 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 SLC39A14Q15043 492 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 SURF1Q15526 300 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 WDR49Q8IV35 697 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 MYCBPAPQ8TBZ2 947 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 MMS19Q96T76 1030 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 MRPL45Q9BRJ2 306 aaKnown RBP20.1■□□□□ 0.81
SRSF4-202ENST00000466448 NME7Q9Y5B8 376 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 RALGAPA1Q6GYQ0 2036 aa20.1■□□□□ 0.81
SRSF4-202ENST00000466448 CEP295Q9C0D2 2601 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 EML5Q05BV3 1969 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 LNP1A1A4G5 178 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 CYP17A1P05093 508 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 NOP14P78316 857 aaKnown RBP20.09■□□□□ 0.81
SRSF4-202ENST00000466448 SLC7A9P82251 487 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 USP39Q53GS9 565 aaKnown RBP20.09■□□□□ 0.81
SRSF4-202ENST00000466448 MDH1BQ5I0G3 518 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 PMS2CLQ68D20 193 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 ANO7Q6IWH7 933 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 PSAPL1Q6NUJ1 521 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 STXBP4Q6ZWJ1 553 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 TRAPPC11Q7Z392 1133 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 FILIP1Q7Z7B0 1213 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 RASSF3Q86WH2 238 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 RNF38Q9H0F5 515 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 LAMA1P25391 3075 aa20.09■□□□□ 0.81
SRSF4-202ENST00000466448 C4orf47A7E2U8 309 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 F8VP50 259 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 SCAMP3O14828 347 aaKnown RBP20.08■□□□□ 0.81
SRSF4-202ENST00000466448 TRIM66O15016 1216 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 OLFM2O95897 454 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 C11orf74Q86VG3 221 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 ADGRG2Q8IZP9 1017 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 CCDC33Q8N5R6 958 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 MDGA1Q8NFP4 955 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 CNOT6LQ96LI5 555 aaKnown RBP20.08■□□□□ 0.81
SRSF4-202ENST00000466448 C8orf48Q96LL4 319 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 KIAA1586Q9HCI6 787 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 TMEM30AQ9NV96 361 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 SMPD4Q9NXE4 827 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 EHD2Q9NZN4 543 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 MMP17Q9ULZ9 603 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 CPQQ9Y646 472 aa20.08■□□□□ 0.81
SRSF4-202ENST00000466448 SDK1Q7Z5N4 2213 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 TACC1O75410 805 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 OAS1P00973 400 aaKnown RBP20.07■□□□□ 0.8
SRSF4-202ENST00000466448 CST3P01034 146 aaPredicted RBP20.07■□□□□ 0.8
SRSF4-202ENST00000466448 DLATP10515 647 aaKnown RBP20.07■□□□□ 0.8
SRSF4-202ENST00000466448 BCKDHBP21953 392 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 GNL1P36915 607 aaPredicted RBP20.07■□□□□ 0.8
SRSF4-202ENST00000466448 PPP3CCP48454 512 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 CACNA2D1P54289 1103 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 MESP2Q0VG99 397 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 CRY1Q16526 586 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 SNRNP35Q16560 246 aaKnown RBP20.07■□□□□ 0.8
SRSF4-202ENST00000466448 HS2ST1Q7LGA3 356 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 SFTPA1Q8IWL2 248 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 KIAA1958Q8N8K9 716 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 TNMDQ9H2S6 317 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 SNX25Q9H3E2 840 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 CFAP47Q6ZTR5 3102 aa20.07■□□□□ 0.8
SRSF4-202ENST00000466448 KIAA1549LQ6ZVL6 1849 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 CNOT1A5YKK6 2376 aaKnown RBP20.06■□□□□ 0.8
SRSF4-202ENST00000466448 ABL1P00519 1130 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 HNRNPLP14866 589 aaKnown RBP eCLIP20.06■□□□□ 0.81e-7■□□□□ 9.4
SRSF4-202ENST00000466448 SLC6A11P48066 632 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 NOVA1P51513 510 aaKnown RBP20.06■□□□□ 0.8
SRSF4-202ENST00000466448 TAF10Q12962 218 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 DHCR24Q15392 516 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 E2F4Q16254 413 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 EPM2AIP1Q7L775 607 aaPredicted RBP20.06■□□□□ 0.8
SRSF4-202ENST00000466448 RDH13Q8NBN7 331 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 OR6B3Q8NGW1 331 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 TRIM9Q9C026 710 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 ZNF518BQ9C0D4 1074 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 DPEP3Q9H4B8 488 aa20.06■□□□□ 0.8
SRSF4-202ENST00000466448 AGPAT3Q9NRZ7 376 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms