RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 B3GALNT2Q8NCR0 500 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 MYCBPAPQ8TBZ2 947 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 CLP1Q92989 425 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 KAT5Q92993 513 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SECISBP2LQ93073 1101 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 CYFIP2Q96F07 1278 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 TTPALQ9BTX7 342 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 OSBPL7Q9BZF2 842 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ELOVL4Q9GZR5 314 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SMYD3Q9H7B4 428 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 RC3H2Q9HBD1 1191 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ABCB6Q9NP58 842 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SPTLC3Q9NUV7 552 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SEPT11Q9NVA2 429 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 PARVAQ9NVD7 372 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 COMMD8Q9NX08 183 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 DDX43Q9NXZ2 648 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SPG21Q9NZD8 308 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 OGFRQ9NZT2 677 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 DPP7Q9UHL4 492 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 BACE2Q9Y5Z0 518 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 LTBP2Q14767 1821 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 TRIP11Q15643 1979 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 O00370 1275 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 TRIM66O15016 1216 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SPTLC1O15269 473 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 MTA2O94776 668 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 FBXO21O94952 628 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 UPP2O95045 317 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 FTLP02792 175 aaPredicted RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SOD2P04179 222 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 GLI1P08151 1106 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 MMEP08473 750 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 FAM200BP0CF97 657 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 FGFR3P22607 806 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 ITGB8P26012 769 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SLC1A1P43005 524 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 MAGEA11P43364 429 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 GABRB2P47870 512 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SLC11A1P49279 550 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 CDH8P55286 799 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 TUBB4BP68371 445 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 NOMO3P69849 1222 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 APBA1Q02410 837 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 GFPT1Q06210 699 aaPredicted RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 MRPL58Q14197 206 aaKnown RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 RAB30Q15771 203 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 CFAP221Q4G0U5 840 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 INTS6LQ5JSJ4 861 aaKnown RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 RASIP1Q5U651 963 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 WSCD1Q658N2 575 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 TPGS2Q68CL5 300 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 KIAA1841Q6NSI8 718 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 FAM171BQ6P995 826 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 ELMSAN1Q6PJG2 1045 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 TOGARAM2Q6ZUX3 1019 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 OTOP2Q7RTS6 562 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 DDX53Q86TM3 631 aaKnown RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 NOP9Q86U38 636 aaKnown RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 ERICH1Q86X53 443 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 HERC6Q8IVU3 1022 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SPPL2BQ8TCT7 592 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 KBTBD7Q8WVZ9 684 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 PIK3R5Q8WYR1 880 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 KCTD13Q8WZ19 329 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 RFFLQ8WZ73 363 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 ANKRD7Q92527 254 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 C18orf8Q96DM3 657 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SMARCD1Q96GM5 515 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 IGSF21Q96ID5 467 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF830Q96NB3 372 aaPredicted RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SYT15Q9BQS2 421 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 MRPL45Q9BRJ2 306 aaKnown RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 KLF16Q9BXK1 252 aaPredicted RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 DUSP16Q9BY84 665 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 CWH43Q9H720 699 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 SYNCQ9H7C4 482 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 ADAM22Q9P0K1 906 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 FNIP2Q9P278 1114 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 DNMT3LQ9UJW3 386 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 AJAP1Q9UKB5 411 aaPredicted RBP6.35□□□□□ -1.39
CHMP3-206ENST00000466032 NENFQ9UMX5 172 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 PAXBP1Q9Y5B6 917 aa6.35□□□□□ -1.39
CHMP3-206ENST00000466032 TET1Q8NFU7 2136 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 NCANO14594 1321 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 C5orf67F2Z3F1 127 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 M0QYV0 167 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 MYO1FO00160 1098 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 PPEF2O14830 753 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 XPO1O14980 1071 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 CTIFO43310 598 aaKnown RBP6.34□□□□□ -1.39
CHMP3-206ENST00000466032 LPXNO60711 386 aa6.34□□□□□ -1.39
CHMP3-206ENST00000466032 EFEMP2O95967 443 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms