RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TTC3P53804 2025 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 NRCAMQ92823 1304 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 IGSF9BQ9UPX0 1349 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 MYO7AQ13402 2215 aa5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 PRRC2BQ5JSZ5 2229 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-204ENST00000465860 MYH15Q9Y2K3 1946 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CCDC194A0A1B0GVG4 234 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CCNT1O60563 726 aaKnown RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 GAS7O60861 476 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 C22orf31O95567 290 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CAPNS1P04632 268 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 GHRP10912 638 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 ATP2A2P16615 1042 aaKnown RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 KLRC1P26715 233 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CD52P31358 61 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 LTBRP36941 435 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 TOB1P50616 345 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CLCN3P51790 818 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 SETQ01105 290 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 PRKCEQ02156 737 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 ADAM9Q13443 819 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 DRP2Q13474 957 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 LPIN1Q14693 890 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 RABEP1Q15276 862 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 FXNQ16595 210 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 ZXDCQ2QGD7 858 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 PLEKHG4Q58EX7 1191 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM26FQ5R3K3 315 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 MCTP2Q6DN12 878 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 PPP4R3AQ6IN85 833 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 GALNT17Q6IS24 598 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 MTHFD1LQ6UB35 978 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 ANO5Q75V66 913 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 MIER3Q7Z3K6 550 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 NEK8Q86SG6 692 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 RTN4RL1Q86UN2 441 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 KIAA0319LQ8IZA0 1049 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 LRRC71Q8N4P6 559 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 LINC01465Q8N7H1 131 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 TXNDC5Q8NBS9 432 aaKnown RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 FBXO18Q8NFZ0 1043 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 ATP8B4Q8TF62 1192 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 BORCS6Q96GS4 357 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 RIT2Q99578 217 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CDX2Q99626 313 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 LLPHQ9BRT6 129 aaKnown RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 AZI2Q9H6S1 392 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CERS4Q9HA82 394 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 RGL1Q9NZL6 768 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 COA3Q9Y2R0 106 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 PCDHA10Q9Y5I2 948 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 CDY2AQ9Y6F7 541 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 SLC4A7Q9Y6M7 1214 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 C5orf42Q9H799 3197 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 MUC3AQ02505 3323 aa5.38□□□□□ -1.55
EXOSC3-204ENST00000465860 BRWD1Q9NSI6 2320 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 TCRBV5S2A0A599 114 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 MROH6A6NGR9 719 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 RRN3P2A6NIE6 340 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 H7BY64 318 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 DDX3XO00571 662 aaKnown RBP eCLIP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 HGSO14964 777 aaPredicted RBP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 HBP1O60381 514 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 MGEA5O60502 916 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 GPR32O75388 356 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 CSDE1O75534 798 aaKnown RBP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 GJB6O95452 261 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 VTNP04004 478 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 CA3P07451 260 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 ATP2B1P20020 1258 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 GJB2P29033 226 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 MCM7P33993 719 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 RFC2P35250 354 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 GRIA2P42262 883 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 NPEPPSP55786 919 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 MRPS6P82932 125 aaKnown RBP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 PPP2R5CQ13362 524 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 LSAMPQ13449 338 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 ZNF174Q15697 407 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 KIZQ2M2Z5 673 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 TMEM266Q2M3C6 531 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 FBXO47Q5MNV8 452 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM160B1Q5W0V3 765 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 PLA2G4FQ68DD2 849 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 MIS18BP1Q6P0N0 1132 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 MOXD1Q6UVY6 613 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 RPAINQ86UA6 219 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 HERC6Q8IVU3 1022 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 SMAP1Q8IYB5 467 aaPredicted RBP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 RPUSD2Q8IZ73 545 aaKnown RBP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 FAM177A1Q8N128 213 aaPredicted RBP5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 C4orf32Q8N8J7 132 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 TIFAQ96CG3 184 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 DYDC2Q96IM9 177 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 CHAMP1Q96JM3 812 aa5.37□□□□□ -1.55
EXOSC3-204ENST00000465860 C8orf76Q96K31 380 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms