RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 DHPSP49366 369 aaPredicted RBP12.62□□□□□ -0.39
CNOT4-208ENST00000465721 TFAMQ00059 246 aaKnown RBP12.62□□□□□ -0.39
CNOT4-208ENST00000465721 KCNA1Q09470 495 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 MESP2Q0VG99 397 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 NR1H3Q13133 447 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 CRY1Q16526 586 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 TMEM92Q6UXU6 159 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 ZNF720Q7Z2F6 126 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 SFR1Q86XK3 245 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 SCN4BQ8IWT1 228 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 ADGRF2Q8IZF7 708 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 CCDC33Q8N5R6 958 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 SPATA18Q8TC71 538 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 ZCCHC14Q8WYQ9 949 aaKnown RBP12.62□□□□□ -0.39
CNOT4-208ENST00000465721 FNBP1Q96RU3 617 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 SIX4Q9UIU6 781 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 AGAP1Q9UPQ3 857 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 BPTFQ12830 3046 aa12.62□□□□□ -0.39
CNOT4-208ENST00000465721 SETXQ7Z333 2677 aaKnown RBP12.61□□□□□ -0.39
CNOT4-208ENST00000465721 OLFM2O95897 454 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 PYGBP11216 843 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 HDCP19113 662 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 UAP1L1Q3KQV9 507 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 TRIM61Q5EBN2 209 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 KIAA1211LQ6NV74 962 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 FAM171BQ6P995 826 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 SPATA2LQ8IUW3 424 aaPredicted RBP12.61□□□□□ -0.39
CNOT4-208ENST00000465721 TOP6BLQ8N6T0 577 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 FSIP1Q8NA03 581 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 PIGKQ92643 395 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 SAAL1Q96ER3 474 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 FAM213AQ9BRX8 229 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 MBD1Q9UIS9 605 aaPredicted RBP12.61□□□□□ -0.39
CNOT4-208ENST00000465721 ITGA11Q9UKX5 1188 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 NEUROG3Q9Y4Z2 214 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 CABIN1Q9Y6J0 2220 aa12.61□□□□□ -0.39
CNOT4-208ENST00000465721 GOLGA4Q13439 2230 aaKnown RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 SGK1O00141 431 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 LEFTY2O00292 366 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 TNFRSF10BO14763 440 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 HYAL3O43820 417 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 ATP2C2O75185 946 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 PFKLP17858 780 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 PCSK1P29120 753 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 LONP1P36776 959 aaKnown RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 PTGER3P43115 390 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 USP46P62068 366 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 PSMC1P62191 440 aaKnown RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 MRPS21P82921 87 aaKnown RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 LMAN2Q12907 356 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 POSTNQ15063 836 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 SOWAHAQ2M3V2 549 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 PEAR1Q5VY43 1037 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 ARMCX6Q7L4S7 300 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 LIMS2Q7Z4I7 341 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 FILIP1Q7Z7B0 1213 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 PIP4P1Q86T03 277 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 C12orf40Q86WS4 652 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 ALLCQ8N6M5 410 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 FRMD1Q8N878 549 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 IL17RCQ8NAC3 791 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 TXNDC5Q8NBS9 432 aaKnown RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 KBTBD7Q8WVZ9 684 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 RLN3Q8WXF3 142 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 MYLPFQ96A32 169 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 SPATA17Q96L03 361 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 SYT15Q9BQS2 421 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 TMEM74BQ9NUR3 256 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 RBAKQ9NYW8 714 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 KLK13Q9UKR3 277 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 HELZ2Q9BYK8 2649 aaKnown RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 PTPRJQ12913 1337 aa12.6□□□□□ -0.39
CNOT4-208ENST00000465721 ATXN2Q99700 1313 aaKnown RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-208ENST00000465721 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 KLF8O95600 359 aaPredicted RBP12.59□□□□□ -0.39
CNOT4-208ENST00000465721 ENGP17813 658 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 DDIT3P35638 169 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 EIF2DP41214 584 aaKnown RBP12.59□□□□□ -0.39
CNOT4-208ENST00000465721 KIR2DL1P43626 348 aaPredicted RBP12.59□□□□□ -0.39
CNOT4-208ENST00000465721 MAPK8P45983 427 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 LHX1P48742 406 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 PDE6CP51160 858 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 CASP5P51878 434 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 SLC7A9P82251 487 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 SEMA3BQ13214 749 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 DHCR24Q15392 516 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 MAP7D1Q3KQU3 841 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
CNOT4-208ENST00000465721 VSTM1Q6UX27 236 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 C4orf50Q6ZRC1 276 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 LPCAT2Q7L5N7 544 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 DYMQ7RTS9 669 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 TTC30AQ86WT1 665 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 SYT12Q8IV01 421 aa12.59□□□□□ -0.39
CNOT4-208ENST00000465721 TMEFF1Q8IYR6 380 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms