RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 CD19P15391 556 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 CEBPBP17676 345 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 RFX1P22670 979 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 GABRR2P28476 465 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 SSTR3P32745 418 aaPredicted RBP21.51■■□□□ 1.03
PTCD3-206ENST00000465560 ZNF445P59923 1031 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 UBXN1Q04323 297 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 ARHGAP44Q17R89 818 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 KLHDC7AQ5VTJ3 777 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 CLEC20AQ6ZU45 233 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 GAREM2Q75VX8 874 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 ZMIZ2Q8NF64 920 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 SHKBP1Q8TBC3 707 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 ING5Q8WYH8 240 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 SHC3Q92529 594 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 DNAJC12Q9UKB3 198 aa21.51■■□□□ 1.03
PTCD3-206ENST00000465560 MAGED2Q9UNF1 606 aaPredicted RBP21.51■■□□□ 1.03
PTCD3-206ENST00000465560 A0A1W2PRU2 124 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 BEST1O76090 585 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 LAMP2P13473 410 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 KRT5P13647 590 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 NPR3P17342 541 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 CDC25CP30307 473 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 MAP3K7CLP57077 242 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 ERGIC2Q96RQ1 377 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 TTLL2Q9BWV7 592 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 DUSP16Q9BY84 665 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 CD320Q9NPF0 282 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 EHD2Q9NZN4 543 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 SIK3Q9Y2K2 1263 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 FHOD1Q9Y613 1164 aa21.5■■□□□ 1.03
PTCD3-206ENST00000465560 O00370 1275 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 UCHL3P15374 230 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 GJA1P17302 382 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 KLK7P49862 253 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 SYCP1Q15431 976 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 FILIP1LQ4L180 1135 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 NUP93Q8N1F7 819 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 GCNAQ96QF7 691 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 NAA15Q9BXJ9 866 aaKnown RBP21.49■■□□□ 1.03
PTCD3-206ENST00000465560 GANQ9H2C0 597 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 PNPLA8Q9NP80 782 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 RTN4Q9NQC3 1192 aaKnown RBP21.49■■□□□ 1.03
PTCD3-206ENST00000465560 GDE1Q9NZC3 331 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 TSPAN16Q9UKR8 245 aa21.49■■□□□ 1.03
PTCD3-206ENST00000465560 TNFRSF10BO14763 440 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 F11P03951 625 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 SLC5A3P53794 718 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 USP46P62068 366 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 STILQ15468 1287 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 TEAD2Q15562 447 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 GOLGA7BQ2TAP0 167 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 TMEM150AQ86TG1 271 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 ANKRD52Q8NB46 1076 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 TFAP2BQ92481 460 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 COL25A1Q9BXS0 654 aaPredicted RBP21.48■■□□□ 1.03
PTCD3-206ENST00000465560 ATXN3LQ9H3M9 355 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 DAAM1Q9Y4D1 1078 aa21.48■■□□□ 1.03
PTCD3-206ENST00000465560 A0A1B0GTH6 734 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 TADA3O75528 432 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 RTN3O95197 1032 aaPredicted RBP21.47■■□□□ 1.03
PTCD3-206ENST00000465560 SERPINC1P01008 464 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 BRD2P25440 801 aaKnown RBP21.47■■□□□ 1.03
PTCD3-206ENST00000465560 BCAT1P54687 386 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 RAPGEF1Q13905 1077 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 POTEHQ6S545 545 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 LCLAT1Q6UWP7 414 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 TTC30AQ86WT1 665 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 MCRS1Q96EZ8 462 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 ZSWIM1Q9BR11 485 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 GPR88Q9GZN0 384 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 FAM207AQ9NSI2 230 aaPredicted RBP21.47■■□□□ 1.03
PTCD3-206ENST00000465560 COMMD8Q9NX08 183 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 HESX1Q9UBX0 185 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.47■■□□□ 1.03
PTCD3-206ENST00000465560 BDP1A6H8Y1 2624 aa21.47■■□□□ 1.03
PTCD3-206ENST00000465560 HELZP42694 1942 aaKnown RBP21.47■■□□□ 1.03
PTCD3-206ENST00000465560 HHLA1C9JL84 531 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 FOXN3O00409 490 aaPredicted RBP21.46■■□□□ 1.03
PTCD3-206ENST00000465560 TEX33O43247 280 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 GNA15P30679 374 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 USP8P40818 1118 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 SLC8A3P57103 927 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 FANCCQ00597 558 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 DRAP1Q14919 205 aaPredicted RBP21.46■■□□□ 1.03
PTCD3-206ENST00000465560 CNGA2Q16280 664 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 ARHGAP15Q53QZ3 475 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 RNF135Q8IUD6 432 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 PCMTD1Q96MG8 357 aaPredicted RBP21.46■■□□□ 1.03
PTCD3-206ENST00000465560 NAP1L5Q96NT1 182 aaPredicted RBP21.46■■□□□ 1.03
PTCD3-206ENST00000465560 STK33Q9BYT3 514 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 IL37Q9NZH6 218 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 LIMD1Q9UGP4 676 aa21.46■■□□□ 1.03
PTCD3-206ENST00000465560 EPHB6O15197 1021 aa21.45■■□□□ 1.02
PTCD3-206ENST00000465560 CALCAP01258 141 aa21.45■■□□□ 1.02
PTCD3-206ENST00000465560 DDX6P26196 483 aaKnown RBP eCLIP21.45■■□□□ 1.02
PTCD3-206ENST00000465560 YWHAQP27348 245 aa21.45■■□□□ 1.02
PTCD3-206ENST00000465560 CYP4F8P98187 520 aa21.45■■□□□ 1.02
PTCD3-206ENST00000465560 BST2Q10589 180 aaKnown RBP21.45■■□□□ 1.02
PTCD3-206ENST00000465560 IFRD2Q12894 506 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms