RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PCDH15Q96QU1 1955 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CELSR3Q9NYQ7 3312 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 GON4LQ3T8J9 2241 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CDX4O14627 284 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-207ENST00000465209 GIPC1O14908 333 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 RHOBTB1O94844 696 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
COL11A1-207ENST00000465209 NFATC1O95644 943 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CAVIN2O95810 425 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 OAS1P00973 400 aaKnown RBP11.7□□□□□ -0.54
COL11A1-207ENST00000465209 PFKLP17858 780 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 WARSP23381 471 aaKnown RBP11.7□□□□□ -0.54
COL11A1-207ENST00000465209 SLC7A9P82251 487 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CREB5Q02930 508 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 KCNB1Q14721 858 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 ELF2Q15723 593 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 RRAGBQ5VZM2 374 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 FAM173BQ6P4H8 233 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 VSTM1Q6UX27 236 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 SV2BQ7L1I2 683 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CBWD2Q8IUF1 395 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 SCN4BQ8IWT1 228 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 KIAA1958Q8N8K9 716 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 PCED1BQ96HM7 432 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CHAMP1Q96JM3 812 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CNOT6LQ96LI5 555 aaKnown RBP11.7□□□□□ -0.54
COL11A1-207ENST00000465209 TPSD1Q9BZJ3 242 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 RNF38Q9H0F5 515 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 GZF1Q9H116 711 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-207ENST00000465209 PCIF1Q9H4Z3 704 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 CDH9Q9ULB4 789 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 MMP17Q9ULZ9 603 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 PCDHB13Q9Y5F0 798 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 LOC400499M0QZD8 3231 aa11.7□□□□□ -0.54
COL11A1-207ENST00000465209 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 ZNF840PA6NDX5 716 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 C4orf47A7E2U8 309 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 PATE3B3GLJ2 98 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 LEFTY2O00292 366 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 KRT19P08727 400 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 TMEM191BP0C7N4 346 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 HDCP19113 662 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 BDNFP23560 247 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 DGKEP52429 567 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 CACNA2D1P54289 1103 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 NOP14P78316 857 aaKnown RBP11.69□□□□□ -0.54
COL11A1-207ENST00000465209 CRY1Q16526 586 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 C4orf50Q6ZRC1 276 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 C12orf40Q86WS4 652 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 PHTF2Q8N3S3 785 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 FSIP1Q8NA03 581 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 TSTD1Q8NFU3 115 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 EXOC4Q96A65 974 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 HPDLQ96IR7 371 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 MAGEC2Q9UBF1 373 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-207ENST00000465209 INVSQ9Y283 1065 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 CACNA1EQ15878 2313 aa11.69□□□□□ -0.54
COL11A1-207ENST00000465209 ADAMTS9Q9P2N4 1935 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 A0A0A0MRY4 1105 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 KIAA0391O15091 583 aaKnown RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 PROS1P07225 676 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 IDEP14735 1019 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 EIF2DP41214 584 aaKnown RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 KIR2DL1P43626 348 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 NOVA1P51513 510 aaKnown RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 SEC13P55735 322 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 PSMD2Q13200 908 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 E2F4Q16254 413 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 C2orf27AQ580R0 203 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 ANO7Q6IWH7 933 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 EPM2AIP1Q7L775 607 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 FILIP1Q7Z7B0 1213 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 C11orf74Q86VG3 221 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 WDR49Q8IV35 697 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 ADGRG2Q8IZP9 1017 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 IL17RCQ8NAC3 791 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 TTC16Q8NEE8 873 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 MYCBPAPQ8TBZ2 947 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 HPS3Q969F9 1004 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 ANKRD36BP1Q96IX9 119 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 C8orf48Q96LL4 319 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 FNBP1Q96RU3 617 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 MRPL45Q9BRJ2 306 aaKnown RBP11.68□□□□□ -0.54
COL11A1-207ENST00000465209 PANK4Q9NVE7 773 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 HSPBP1Q9NZL4 362 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 CPQQ9Y646 472 aa11.68□□□□□ -0.54
COL11A1-207ENST00000465209 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 C1QTNF9BB2RNN3 333 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 F8VP50 259 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 SGK1O00141 431 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 TRIM66O15016 1216 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 TGFB1I1O43294 461 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 ADAM23O75077 832 aa11.67□□□□□ -0.54
COL11A1-207ENST00000465209 TACC1O75410 805 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms