RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 RUNX3Q13761 415 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 MTF1Q14872 753 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 WDR44Q5JSH3 913 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 C1orf220Q5T0J3 134 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 SV2AQ7L0J3 742 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 ARL14EPQ8N8R7 260 aaPredicted RBP27.54■■■□□ 2
U2AF1-206ENST00000464750 CYP2S1Q96SQ9 504 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 TTLL2Q9BWV7 592 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 EBF3Q9H4W6 596 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 TMEM30AQ9NV96 361 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 ZSCAN32Q9NX65 697 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 EHD2Q9NZN4 543 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 GCNT4Q9P109 453 aa27.54■■■□□ 2
U2AF1-206ENST00000464750 MYH10P35580 1976 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 IKBKBO14920 756 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 MAPK13O15264 365 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 AKAP3O75969 853 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 P4HA1P13674 534 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 PIK3CAP42336 1068 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 CCR3P51677 355 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 VAMP7P51809 220 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 NOP14P78316 857 aaKnown RBP27.53■■■□□ 2
U2AF1-206ENST00000464750 NUCB2P80303 420 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 GAS6Q14393 721 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 ZNF77Q15935 545 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 SGSM1Q2NKQ1 1148 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 TTC16Q8NEE8 873 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 NELL1Q92832 810 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 TRPM5Q9NZQ8 1165 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 OTOGLQ3ZCN5 2332 aa27.53■■■□□ 2
U2AF1-206ENST00000464750 ATP8B3O60423 1300 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 ARSAP15289 507 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 DGKKQ5KSL6 1271 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 MAMSTRQ6ZN01 415 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 Q6ZS52 159 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 INTS8Q75QN2 995 aaKnown RBP27.52■■■□□ 2
U2AF1-206ENST00000464750 FAM186BQ8IYM0 893 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 ZBTB44Q8NCP5 570 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 ATRIPQ8WXE1 791 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 TAF4BQ92750 862 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 TNIP3Q96KP6 325 aa27.52■■■□□ 2
U2AF1-206ENST00000464750 HLA-DRAP01903 254 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 TRIM49P0CI25 452 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 TRIM49CP0CI26 452 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 TDGF1P13385 188 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 RPL13P26373 211 aaKnown RBP27.51■■□□□ 1.99
U2AF1-206ENST00000464750 PDE6CP51160 858 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 PNOCQ13519 176 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 PPP2R5DQ14738 602 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 PDGFRLQ15198 375 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 ZCWPW2Q504Y3 356 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 SPOPLQ6IQ16 392 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 FAM35AQ86V20 835 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 SMYD4Q8IYR2 804 aaPredicted RBP27.51■■□□□ 1.99
U2AF1-206ENST00000464750 FMR1NBQ8N0W7 255 aaPredicted RBP27.51■■□□□ 1.99
U2AF1-206ENST00000464750 MED10Q9BTT4 135 aa27.51■■□□□ 1.99
U2AF1-206ENST00000464750 GOLGA6L4A6NEF3 574 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 OTOL1A6NHN0 477 aaPredicted RBP27.5■■□□□ 1.99
U2AF1-206ENST00000464750 ASS1P00966 412 aaKnown RBP27.5■■□□□ 1.99
U2AF1-206ENST00000464750 KRT13P13646 458 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 HDCP19113 662 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 SATB1Q01826 763 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 IFRD2Q12894 506 aaPredicted RBP27.5■■□□□ 1.99
U2AF1-206ENST00000464750 CCINQ13939 588 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 SPEM1Q8N4L4 309 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 SH3RF2Q8TEC5 729 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 FAM126AQ9BYI3 521 aaPredicted RBP27.5■■□□□ 1.99
U2AF1-206ENST00000464750 ARHGAP26Q9UNA1 814 aa27.5■■□□□ 1.99
U2AF1-206ENST00000464750 PFKLP17858 780 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 PSMC2P35998 433 aaKnown RBP27.49■■□□□ 1.99
U2AF1-206ENST00000464750 ASPAP45381 313 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 CXCL12P48061 93 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 GCLMP48507 274 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 IFNAR2P48551 515 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 ADAM9Q13443 819 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 ACOT1Q86TX2 421 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 SUMF1Q8NBK3 374 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 OSCP1Q8WVF1 389 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 CHFRQ96EP1 664 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 MMRN2Q9H8L6 949 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.49■■□□□ 1.99
U2AF1-206ENST00000464750 DUS2Q9NX74 493 aaKnown RBP27.49■■□□□ 1.99
U2AF1-206ENST00000464750 HMGXB4Q9UGU5 601 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 WNT6Q9Y6F9 365 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 GPR179Q6PRD1 2367 aa27.49■■□□□ 1.99
U2AF1-206ENST00000464750 ZNF840PA6NDX5 716 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 LILRB5O75023 590 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 TCF3P15923 654 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 PPP3CCP48454 512 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 NDST1P52848 882 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 PPP3CAQ08209 521 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 TAF10Q12962 218 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 ORC1Q13415 861 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 PAQR9Q6ZVX9 377 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 NUP93Q8N1F7 819 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 CPA6Q8N4T0 437 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 SLITRK1Q96PX8 696 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 HINFPQ9BQA5 517 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 IMPG2Q9BZV3 1241 aa27.48■■□□□ 1.99
U2AF1-206ENST00000464750 RMND1Q9NWS8 449 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms