RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 RAB3IPQ96QF0 476 aaPredicted RBP8.93□□□□□ -0.98
ACTB-208ENST00000464611 CNPY3Q9BT09 278 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 DDX23Q9BUQ8 820 aaKnown RBP8.93□□□□□ -0.98
ACTB-208ENST00000464611 MAK16Q9BXY0 300 aaKnown RBP8.93□□□□□ -0.98
ACTB-208ENST00000464611 PITPNM3Q9BZ71 974 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 MTMR12Q9C0I1 747 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 XYLT2Q9H1B5 865 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 SYNCQ9H7C4 482 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 YY1AP1Q9H869 796 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 SAYSD1Q9NPB0 183 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.93□□□□□ -0.986e-33■■■■■ 58.9
ACTB-208ENST00000464611 BTBD7Q9P203 1132 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 PSMC3IPQ9P2W1 217 aaPredicted RBP8.93□□□□□ -0.98
ACTB-208ENST00000464611 PRKAG3Q9UGI9 489 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 CPA4Q9UI42 421 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 ITGA11Q9UKX5 1188 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 DNPEPQ9ULA0 475 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 R3HDM2Q9Y2K5 976 aaKnown RBP8.93□□□□□ -0.98
ACTB-208ENST00000464611 IVNS1ABPQ9Y6Y0 642 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 PTPRJQ12913 1337 aa8.93□□□□□ -0.98
ACTB-208ENST00000464611 MGAMO43451 1857 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 IQANK1A0A1B0GTG1 560 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 F8VP50 259 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 SGK1O00141 431 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 TRDMT1O14717 391 aaKnown RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 MCF2LO15068 1137 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 TRPA1O75762 1119 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 CNMDO75829 334 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 ENDOD1O94919 500 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 FAM163BP0C2L3 166 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 ZFXP17010 805 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 ASPAP45381 313 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 ZNF143P52747 638 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 PSMC1P62191 440 aaKnown RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 PTPN11Q06124 597 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 BNIP1Q12981 228 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 IRF5Q13568 498 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 ARHGEF6Q15052 776 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 SEPT7Q16181 437 aaKnown RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 EFCAB12Q6NXP0 572 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 BZW1Q7L1Q6 419 aaKnown RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 ARCQ7LC44 396 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 ZNF467Q7Z7K2 595 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 ZBTB33Q86T24 672 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 TRIM42Q8IWZ5 723 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 WDTC1Q8N5D0 677 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 DNAJC5GQ8N7S2 189 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 KCTD6Q8NC69 237 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 DENND1AQ8TEH3 1009 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 TEKT4Q8WW24 435 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 SOCS4Q8WXH5 440 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 KAT2BQ92831 832 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 EMID1Q96A84 441 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 SPATA33Q96N06 139 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 TGS1Q96RS0 853 aaKnown RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 CYTH2Q99418 400 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 MMP19Q99542 508 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 ADPGKQ9BRR6 497 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 VPS11Q9H270 941 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 TRABDQ9H4I3 376 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 VTA1Q9NP79 307 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 TXLNGQ9NUQ3 528 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 ZMYND8Q9ULU4 1186 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 BARX2Q9UMQ3 279 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.92□□□□□ -0.98
ACTB-208ENST00000464611 USH1CQ9Y6N9 552 aa8.92□□□□□ -0.98
ACTB-208ENST00000464611 DOCK5Q9H7D0 1870 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 C3orf70A6NLC5 250 aaPredicted RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 INO80B-WBP1J3KQ70 363 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 PPP1R12AO14974 1030 aaPredicted RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 CHADO15335 359 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 STRNO43815 780 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 CILPO75339 1184 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 ASMTLO95671 621 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 TRUB2O95900 331 aaKnown RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 IL1BP01584 269 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 ATP5BP06576 529 aaKnown RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 TXNP10599 105 aaKnown RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 CD19P15391 556 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 PECAM1P16284 738 aaPredicted RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 KRT15P19012 456 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 TGM2P21980 687 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 BRD2P25440 801 aaKnown RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 RFC1P35251 1148 aaPredicted RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 YARSP54577 528 aaKnown RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 RAD23BP54727 409 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 FCGRTP55899 365 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 WNT7BP56706 349 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 SP3Q02447 781 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 SLC25A11Q02978 314 aaKnown RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 MBTD1Q05BQ5 628 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 INCA1Q0VD86 236 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 PDIA2Q13087 525 aaKnown RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 TRIP13Q15645 432 aaPredicted RBP8.91□□□□□ -0.98
ACTB-208ENST00000464611 PDK4Q16654 411 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 WDR72Q3MJ13 1102 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 DCAF4L1Q3SXM0 396 aa8.91□□□□□ -0.98
ACTB-208ENST00000464611 CCDC38Q502W7 563 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms