RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SDCCAG3Q96C92 435 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 OSBPL7Q9BZF2 842 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.44□□□□□ -0.9
HPS4-208ENST00000464362 MYH2Q9UKX2 1941 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 TTC36A6NLP5 189 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 GOLGA8TH3BQL2 631 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 MAFGO15525 162 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 HMBSP08397 361 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 BACE1P56817 501 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 CRADDP78560 199 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 DEUP1Q05D60 604 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 PDCD2Q16342 344 aaPredicted RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 IER5Q5VY09 327 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 ZNF772Q68DY9 489 aaPredicted RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 TTC27Q6P3X3 843 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 DDIASQ8IXT1 998 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 TEX9Q8N6V9 391 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 TEKT4Q8WW24 435 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 SHC3Q92529 594 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 PABPC5Q96DU9 382 aaKnown RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 CGRRF1Q99675 332 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 IDI2Q9BXS1 227 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 GCOM2Q9BZD3 368 aaPredicted RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 C17orf75Q9HAS0 396 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 XAB2Q9HCS7 855 aaKnown RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 BATF3Q9NR55 127 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 FAM8A1Q9UBU6 413 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 DNAJC16Q9Y2G8 782 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 A0A087WZ62 844 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 KCNK1O00180 336 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 CES2O00748 559 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 PEX10O60683 326 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 GJB1P08034 283 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 SERPINB5P36952 375 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 PHEXP78562 749 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 C15orf59Q2T9L4 293 aaPredicted RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 KBTBD12Q3ZCT8 623 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 TTC39BQ5VTQ0 682 aaPredicted RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 NPNTQ6UXI9 565 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 FAM71AQ8IYT1 594 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 ZNF75CPQ92670 426 aaPredicted RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 FDXACB1Q9BRP7 624 aaPredicted RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 SMARCAD1Q9H4L7 1026 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 WARS2Q9UGM6 360 aaKnown RBP9.44□□□□□ -0.9
HPS4-208ENST00000464362 BAG5Q9UL15 447 aa9.44□□□□□ -0.9
HPS4-208ENST00000464362 PMPCBO75439 489 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 NAMPTP43490 491 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 PTPN11Q06124 597 aaPredicted RBP9.43□□□□□ -0.9
HPS4-208ENST00000464362 NUP93Q8N1F7 819 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 MSL3Q8N5Y2 521 aaKnown RBP9.43□□□□□ -0.9
HPS4-208ENST00000464362 KCTD17Q8N5Z5 321 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 TMEM161BQ8NDZ6 487 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 KRT82Q9NSB4 513 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 VAV3Q9UKW4 847 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 GRID1Q9ULK0 1009 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 C15orf41Q9Y2V0 281 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 MARF1Q9Y4F3 1742 aaKnown RBP9.43□□□□□ -0.9
HPS4-208ENST00000464362 A0A1W2PPM1 405 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 FCHO1O14526 889 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 SUPT3HO75486 399 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 KRT16P08779 473 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 MRC1P22897 1456 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 STIP1P31948 543 aaKnown RBP9.43□□□□□ -0.9
HPS4-208ENST00000464362 VHLP40337 213 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 GCNT1Q02742 428 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 ZBTB41Q5SVQ8 909 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 LRRC57Q8N9N7 239 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 PPP1R12AO14974 1030 aaPredicted RBP9.43□□□□□ -0.9
HPS4-208ENST00000464362 PDE5AO76074 875 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 ACO1P21399 889 aaKnown RBP9.43□□□□□ -0.9
HPS4-208ENST00000464362 MIPP30301 263 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 TNFSF9P41273 254 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 RANBP1P43487 201 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 NUDT2P50583 147 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 EFTUD2Q15029 972 aaKnown RBP eCLIP9.43□□□□□ -0.9
HPS4-208ENST00000464362 ACCSLQ4AC99 568 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 SUGP1Q8IWZ8 645 aaKnown RBP9.43□□□□□ -0.9
HPS4-208ENST00000464362 ADAM32Q8TC27 787 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 KIAA1683Q9H0B3 1180 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 PLEKHA5Q9HAU0 1116 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 RNF181Q9P0P0 153 aa9.43□□□□□ -0.9
HPS4-208ENST00000464362 CYP3A7-CYP3A51PA0A087WV96 503 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 M0QYT0 321 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 EEF2KO00418 725 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 STAG3L1P0CL83 205 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 CYP3A7P24462 503 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TNFRSF8P28908 595 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 KPNA2P52292 529 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 PLIN5Q00G26 463 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 MMRN1Q13201 1228 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 BOLA3Q53S33 107 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 SNX30Q5VWJ9 437 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 APOBEC3FQ8IUX4 373 aaKnown RBP9.42□□□□□ -0.9
HPS4-208ENST00000464362 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 TTC8Q8TAM2 541 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 CKAP2Q8WWK9 683 aa9.42□□□□□ -0.9
HPS4-208ENST00000464362 MKL1Q969V6 931 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms