RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 MAB21L3Q8N8X9 362 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 ZBTB44Q8NCP5 570 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 OR6B3Q8NGW1 331 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 USP13Q92995 863 aaPredicted RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 EXOC4Q96A65 974 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 PCED1BQ96HM7 432 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 LRRC3BQ96PB8 259 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 GTPBP4Q9BZE4 634 aaKnown RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 ZSCAN32Q9NX65 697 aa12.69□□□□□ -0.38
RTCB-202ENST00000463455 NDRG2Q9UN36 371 aaKnown RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 MAGED2Q9UNF1 606 aaPredicted RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 ZNF638Q14966 1978 aaKnown RBP12.69□□□□□ -0.38
RTCB-202ENST00000463455 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 A8MXQ7 604 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 SPECC1L-ADORA2AF8WAN1 911 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 KINO60870 393 aaKnown RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 ATP2C2O75185 946 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 PDGFRBP09619 1106 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 PTPN1P18031 435 aaKnown RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 TRIM21P19474 475 aaKnown RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 BDNFP23560 247 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 GRIK1P39086 918 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 MCCD1P59942 119 aaPredicted RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 SGSM1Q2NKQ1 1148 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 TXNDC8Q6A555 127 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 DENND5BQ6ZUT9 1274 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 SPEM1Q8N4L4 309 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 PLEKHO2Q8TD55 490 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 MRPL45Q9BRJ2 306 aaKnown RBP12.68□□□□□ -0.38
RTCB-202ENST00000463455 LMAN1LQ9HAT1 526 aa12.68□□□□□ -0.38
RTCB-202ENST00000463455 ANAPC1Q9H1A4 1944 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 HCRTO43612 131 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 LILRB5O75023 590 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 NR2F2P24468 414 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 CYP27A1Q02318 531 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 CSTF1Q05048 431 aaKnown RBP12.67□□□□□ -0.38
RTCB-202ENST00000463455 USP4Q13107 963 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 MTAPQ13126 283 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 EDRF1Q3B7T1 1238 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 MDH1BQ5I0G3 518 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 SDHAF4Q5VUM1 108 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 UNC93AQ86WB7 457 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 ADSSL1Q8N142 457 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 ATRIPQ8WXE1 791 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 OVCA2Q8WZ82 227 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 FAXDC2Q96IV6 333 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 GKN1Q9NS71 199 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 RMND1Q9NWS8 449 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 GTSE1Q9NYZ3 720 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 TRPM5Q9NZQ8 1165 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 GCNT4Q9P109 453 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 NXF1Q9UBU9 619 aaKnown RBP12.67□□□□□ -0.38
RTCB-202ENST00000463455 ARHGAP26Q9UNA1 814 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 CCL26Q9Y258 94 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 R4GN57 208 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 ZNF292O60281 2723 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 VPS13AQ96RL7 3174 aa12.67□□□□□ -0.38
RTCB-202ENST00000463455 F8VP50 259 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 RTN3O95197 1032 aaPredicted RBP12.66□□□□□ -0.38
RTCB-202ENST00000463455 VNN1O95497 513 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
RTCB-202ENST00000463455 CKMP06732 381 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 TDGF1P13385 188 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 KRT13P13646 458 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 HOXA6P31267 233 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 GTF2H1P32780 548 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 CASP4P49662 377 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 VAMP7P51809 220 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 CDR1P51861 262 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 RUNX3Q13761 415 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 CCINQ13939 588 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 MTF1Q14872 753 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 ZNF77Q15935 545 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 CCDC142Q17RM4 750 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 ZCWPW2Q504Y3 356 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 COBLL1Q53SF7 1204 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 SV2AQ7L0J3 742 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 PDZD8Q8NEN9 1154 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 OSCP1Q8WVF1 389 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 ATP2A3Q93084 1043 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 ZFYVE19Q96K21 471 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 SLITRK1Q96PX8 696 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 IMPG2Q9BZV3 1241 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 EPC1Q9H2F5 836 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 GOLPH3LQ9H4A5 285 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 FAM124BQ9H5Z6 455 aaPredicted RBP12.66□□□□□ -0.38
RTCB-202ENST00000463455 HPS4Q9NQG7 708 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 COMMD8Q9NX08 183 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 NME7Q9Y5B8 376 aa12.66□□□□□ -0.38
RTCB-202ENST00000463455 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
RTCB-202ENST00000463455 TRDMT1O14717 391 aaKnown RBP12.65□□□□□ -0.38
RTCB-202ENST00000463455 AKAP3O75969 853 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms