RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 DERAQ9Y315 318 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 RRP7AQ9Y3A4 280 aaKnown RBP6.51□□□□□ -1.37
COPS3-205ENST00000463097 NR2E1Q9Y466 385 aa6.51□□□□□ -1.37
COPS3-205ENST00000463097 KAT6BQ8WYB5 2073 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 SETD1BQ9UPS6 1966 aaKnown RBP6.5□□□□□ -1.37
COPS3-205ENST00000463097 PNMA6EA0A0J9YXQ4 647 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 PMS2P1A4D2B8 440 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 FAM90A18PA6NE21 464 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 ZNF503-AS2A6NEH8 195 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 FAM90A16PA6NEW6 464 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 FAM90A9PA6NNJ1 464 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 EFCAB8A8MWE9 144 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 FAM90A5PA8MXJ8 464 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 POLRMTO00411 1230 aaKnown RBP6.5□□□□□ -1.37
COPS3-205ENST00000463097 BIN1O00499 593 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 RGS10O43665 173 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 PPP6R2O75170 966 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 SEMA7AO75326 666 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 ITGB1P05556 798 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 ATXN1LP0C7T5 689 aaKnown RBP6.5□□□□□ -1.37
COPS3-205ENST00000463097 FAM90A15PP0C7V4 464 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 FAM90A14PP0C7W9 464 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 LRPAP1P30533 357 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.5□□□□□ -1.37
COPS3-205ENST00000463097 ANKRD1Q15327 319 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 SMAD1Q15797 465 aaKnown RBP6.5□□□□□ -1.37
COPS3-205ENST00000463097 CCNG2Q16589 344 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 WDR45BQ5MNZ6 344 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 ATG16L1Q676U5 607 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 ABLIM2Q6H8Q1 611 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 DOK3Q7L591 496 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 CFAP52Q8N1V2 620 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 ADAMTS15Q8TE58 950 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 PPP2R3CQ969Q6 453 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 SMOQ99835 787 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 SDF4Q9BRK5 362 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 TLR10Q9BXR5 811 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 ABHD16BQ9H3Z7 469 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 NSUN3Q9H649 340 aaKnown RBP6.5□□□□□ -1.37
COPS3-205ENST00000463097 GCM1Q9NP62 436 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 NDUFAF4Q9P032 175 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 TBX20Q9UMR3 447 aa6.5□□□□□ -1.37
COPS3-205ENST00000463097 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 ZSCAN9O15535 394 aaPredicted RBP6.49□□□□□ -1.37
COPS3-205ENST00000463097 ITGB7P26010 798 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 DGKEP52429 567 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 LILRA4P59901 499 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 PIGFQ07326 219 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 DLX2Q07687 328 aaPredicted RBP6.49□□□□□ -1.37
COPS3-205ENST00000463097 NOMO2Q5JPE7 1267 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 FAM205BPQ63HN1 556 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 LAYNQ6UX15 382 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 GALNT5Q7Z7M9 940 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 RALYLQ86SE5 291 aaKnown RBP6.49□□□□□ -1.37
COPS3-205ENST00000463097 TMEFF1Q8IYR6 380 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 USP38Q8NB14 1042 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 TXNDC5Q8NBS9 432 aaKnown RBP6.49□□□□□ -1.37
COPS3-205ENST00000463097 ZMIZ2Q8NF64 920 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 ABHD5Q8WTS1 349 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 CPT1BQ92523 772 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 TRIB1Q96RU8 372 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 PRKRIP1Q9H875 184 aaPredicted RBP6.49□□□□□ -1.37
COPS3-205ENST00000463097 KCNK12Q9HB15 430 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 NTMQ9P121 344 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 GPR34Q9UPC5 381 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 CNTN6Q9UQ52 1028 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 HDAC5Q9UQL6 1122 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 RAD54BQ9Y620 910 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 CYP46A1Q9Y6A2 500 aa6.49□□□□□ -1.37
COPS3-205ENST00000463097 DHHO43323 396 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 TRIM13O60858 407 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 SRGAP2O75044 1071 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 TMEM63AO94886 807 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 PRSS23O95084 383 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 TFRCP02786 760 aaKnown RBP6.48□□□□□ -1.37
COPS3-205ENST00000463097 CHRM3P20309 590 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 KCNA3P22001 575 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 SERPINA4P29622 427 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 MCM2P49736 904 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 RBM5P52756 815 aaKnown RBP eCLIP6.48□□□□□ -1.37
COPS3-205ENST00000463097 DRG2P55039 364 aaKnown RBP6.48□□□□□ -1.37
COPS3-205ENST00000463097 SLFN5Q08AF3 891 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 RIN1Q13671 783 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 CSRP2Q16527 193 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 MEA1Q16626 185 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 TSTQ16762 297 aaKnown RBP6.48□□□□□ -1.37
COPS3-205ENST00000463097 ZNF568Q3ZCX4 644 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 TSHZ3Q63HK5 1081 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 EFCAB12Q6NXP0 572 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 SLC30A10Q6XR72 485 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 RINLQ6ZS11 566 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 MED25Q71SY5 747 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 CBLL1Q75N03 491 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 SYT13Q7L8C5 426 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 GPRIN1Q7Z2K8 1008 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 KRT77Q7Z794 578 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 FAM83AQ86UY5 434 aa6.48□□□□□ -1.37
COPS3-205ENST00000463097 TTC30AQ86WT1 665 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms