RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 PDGFRLQ15198 375 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 ZNF699Q32M78 642 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 ZACNQ401N2 412 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 MDH1BQ5I0G3 518 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 TDRD10Q5VZ19 366 aaKnown RBP7.76□□□□□ -1.17
PTPRF-210ENST00000463041 CEP135Q66GS9 1140 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 SV2AQ7L0J3 742 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 GUF1Q8N442 669 aaKnown RBP7.76□□□□□ -1.17
PTPRF-210ENST00000463041 SUMF1Q8NBK3 374 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 B3GALNT2Q8NCR0 500 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 RUBCNQ92622 972 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 TNIP3Q96KP6 325 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 ELOVL4Q9GZR5 314 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
PTPRF-210ENST00000463041 COMMD8Q9NX08 183 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 GCNT4Q9P109 453 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 CCL26Q9Y258 94 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 ATP8B3O60423 1300 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 DMXL1Q9Y485 3027 aa7.76□□□□□ -1.17
PTPRF-210ENST00000463041 ZNF840PA6NDX5 716 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 GOLGA6L4A6NEF3 574 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 F8VP50 259 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TRDMT1O14717 391 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 ATG13O75143 517 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TADA3O75528 432 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 RTN3O95197 1032 aaPredicted RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 PAPSS2O95340 614 aaPredicted RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 VNN1O95497 513 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 CKMP06732 381 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 KRT13P13646 458 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TRIM21P19474 475 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 HOXA6P31267 233 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 CNR2P34972 360 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 PSMC2P35998 433 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 SOX9P48436 509 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 VAMP7P51809 220 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 DLG4P78352 724 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 GRSF1Q12849 480 aaKnown RBP eCLIP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 ADAM9Q13443 819 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 CCINQ13939 588 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 GAS6Q14393 721 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 PON2Q15165 354 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 CCDC142Q17RM4 750 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TMEM196Q5HYL7 178 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TXNDC11Q6PKC3 985 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TSSK4Q6SA08 328 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 INTS8Q75QN2 995 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 UNC93AQ86WB7 457 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 NUP93Q8N1F7 819 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 CRYBG2Q8N1P7 616 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 GPR161Q8N6U8 529 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 ARL14EPQ8N8R7 260 aaPredicted RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 STKLD1Q8NE28 680 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TTC8Q8TAM2 541 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 OSCP1Q8WVF1 389 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 SECISBP2LQ93073 1101 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 CHAMP1Q96JM3 812 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 SLITRK1Q96PX8 696 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 SLC22A12Q96S37 553 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 B3GNT5Q9BYG0 378 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 GTPBP4Q9BZE4 634 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 EBF3Q9H4W6 596 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 TRPC7Q9HCX4 862 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 HPS4Q9NQG7 708 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 DUS2Q9NX74 493 aaKnown RBP7.75□□□□□ -1.17
PTPRF-210ENST00000463041 ARHGAP26Q9UNA1 814 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 NME7Q9Y5B8 376 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 CEP250Q9BV73 2442 aa7.75□□□□□ -1.17
PTPRF-210ENST00000463041 C2orf78A6NCI8 922 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 OTOL1A6NHN0 477 aaPredicted RBP7.74□□□□□ -1.17
PTPRF-210ENST00000463041 CLDN5O00501 218 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 AKAP3O75969 853 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 ASS1P00966 412 aaKnown RBP7.74□□□□□ -1.17
PTPRF-210ENST00000463041 PRR29P0C7W0 189 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 TDGF1P13385 188 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 DRD1P21728 446 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 NR2F2P24468 414 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 YWHAQP27348 245 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 GTF2H1P32780 548 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 IFNAR2P48551 515 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 GALK1P51570 392 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 USP46P62068 366 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 SLC7A9P82251 487 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 SATB1Q01826 763 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 TAF10Q12962 218 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 MTF1Q14872 753 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 ZNF77Q15935 545 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 EDRF1Q3B7T1 1238 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 FBXO43Q4G163 708 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 C1orf220Q5T0J3 134 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 SNX30Q5VWJ9 437 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 TRIM68Q6AZZ1 485 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 PAQR9Q6ZVX9 377 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 FAM186BQ8IYM0 893 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 FMR1NBQ8N0W7 255 aaPredicted RBP7.74□□□□□ -1.17
PTPRF-210ENST00000463041 CPA6Q8N4T0 437 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 PDZD8Q8NEN9 1154 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 CCDC26Q8TAB7 109 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 SH3RF2Q8TEC5 729 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 OVCA2Q8WZ82 227 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms