RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 LYPLA2O95372 231 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 GAS8O95995 478 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 INSRRP14616 1297 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 SERPINB3P29508 390 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 PTGIRP43119 386 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 DNA2P51530 1060 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 PLTPP55058 493 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 GSTM4Q03013 218 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 TMEM62Q0P6H9 643 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 SCUBE1Q8IWY4 988 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 FAM126BQ8IXS8 530 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 ZBED8Q8IZ13 594 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 PDCD7Q8N8D1 485 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 FBXO25Q8TCJ0 367 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 DQX1Q8TE96 717 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 CEP63Q96MT8 703 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 TRIM51Q9BSJ1 452 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 EIF2AQ9BY44 585 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 CELF4Q9BZC1 486 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 CCDC113Q9H0I3 377 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 SETD4Q9NVD3 440 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 KANSL1LA0AUZ9 987 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 NDC80O14777 642 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 GSC2O15499 205 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 MAGEC1O60732 1142 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 BRAFP15056 766 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 HOXC8P31273 242 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 YWHABP31946 246 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 PPARDQ03181 441 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 KRT72Q14CN4 511 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 ACSBG2Q5FVE4 666 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 GDF6Q6KF10 455 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 BORAQ6PGQ7 559 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 VPS36Q86VN1 386 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 KCTD17Q8N5Z5 321 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 PPP1R13LQ8WUF5 828 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 DPF3Q92784 378 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 CDK5RAP3Q96JB5 506 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 NACC1Q96RE7 527 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 LRRC27Q9C0I9 530 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 TRMT13Q9NUP7 481 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 PPME1Q9Y570 386 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 NCANO14594 1321 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 TPD52L2O43399 206 aaKnown RBP12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 B4GALT4O60513 344 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 MED24O75448 989 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 CLTBP09497 229 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 SPATA31C1P0DKV0 1188 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 HOXD12P35452 270 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 IGBP1P78318 339 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 STK4Q13043 487 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 CABP7Q86V35 215 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 C10orf82Q8WW14 230 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 CALML4Q96GE6 196 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 CADM1Q9BY67 442 aaKnown RBP12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 TRPV6Q9H1D0 765 aa12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 ARMCX3Q9UH62 379 aaPredicted RBP12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 DBR1Q9UK59 544 aaKnown RBP12.02□□□□□ -0.48
TRAPPC3-205ENST00000462715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 PP2D1A8MPX8 630 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 DNAJC6O75061 913 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 CD4P01730 458 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 FGGP02679 453 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 H2AFZP0C0S5 128 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 ALOX15P16050 662 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 MTTPP55157 894 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 BCL2A1Q16548 175 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 LRRC55Q6ZSA7 311 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 H2AFVQ71UI9 128 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 EXOC8Q8IYI6 725 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 FNDC8Q8TC99 324 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 HNRNPABQ99729 332 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 C17orf75Q9HAS0 396 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 ANKEF1Q9NU02 776 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 WRAP73Q9P2S5 460 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 PRKAG2Q9UGJ0 569 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 ZNHIT2Q9UHR6 403 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 ZFP69BQ9UJL9 534 aa12.02□□□□□ -0.49
TRAPPC3-205ENST00000462715 ARHGAP10A1A4S6 786 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 PRPF4O43172 522 aaKnown RBP eCLIP12.01□□□□□ -0.491e-9■■■■■ 35.4
TRAPPC3-205ENST00000462715 EDF1O60869 148 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 RPLP2P05387 115 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 UBTFL6P0CB48 400 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 VARSP26640 1264 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 CCNFP41002 786 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 CAV1Q03135 178 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 FAAP100Q0VG06 881 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 ASPHQ12797 758 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 PTK7Q13308 1070 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 LRRC14Q15048 493 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 P3H1Q32P28 736 aa12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 ZC2HC1CQ53FD0 456 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC3-205ENST00000462715 TAF2Q6P1X5 1199 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms