RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 LIN37Q96GY3 246 aaPredicted RBP3.38□□□□□ -1.87
SMC4-203ENST00000462668 CDHR1Q96JP9 859 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 WRNIP1Q96S55 665 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 OR10A4Q9H209 315 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 TRIM36Q9NQ86 728 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 DNAI1Q9UI46 699 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 CTNND2Q9UQB3 1225 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 USP15Q9Y4E8 981 aaPredicted RBP3.38□□□□□ -1.87
SMC4-203ENST00000462668 CCL27Q9Y4X3 112 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 FLT1P17948 1338 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 F8W031 263 aaPredicted RBP3.38□□□□□ -1.87
SMC4-203ENST00000462668 GRPP07492 148 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 VSIG10L2P0DP72 767 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 OAS2P29728 719 aaKnown RBP3.38□□□□□ -1.87
SMC4-203ENST00000462668 HOXA10P31260 410 aaPredicted RBP3.38□□□□□ -1.87
SMC4-203ENST00000462668 ALDH18A1P54886 795 aaKnown RBP3.38□□□□□ -1.87
SMC4-203ENST00000462668 TIGD6Q17RP2 521 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 NKAPLQ5M9Q1 402 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 LIPMQ5VYY2 423 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 MSANTD2Q6P1R3 559 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 FAM109AQ8N4B1 249 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 TCP11L2Q8N4U5 519 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 Q8NA96 180 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 PLA2G15Q8NCC3 412 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 USP6NLQ92738 828 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 NELFAQ9H3P2 528 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 MSL2Q9HCI7 577 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 DECR2Q9NUI1 292 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 HCN3Q9P1Z3 774 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 CLCA2Q9UQC9 943 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 CDY1Q9Y6F8 540 aa3.38□□□□□ -1.87
SMC4-203ENST00000462668 LOC102723971A0A1B0GUV8 181 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 CDRT15L2A8MXV6 281 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 TAF5LO75529 589 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 GJB3O75712 270 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 AMHP03971 560 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 CD8BP10966 210 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 KCNA3P22001 575 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 GRK5P34947 590 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ACTN2P35609 894 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 KRT20P35900 424 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ERVFC1P60507 584 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 SLFN5Q08AF3 891 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ZIK1Q3SY52 487 aaPredicted RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 SZRD1Q7Z422 152 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ADGRE4PQ86SQ3 457 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ULK2Q8IYT8 1036 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 REPS2Q8NFH8 660 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ZCCHC14Q8WYQ9 949 aaKnown RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 TTPALQ9BTX7 342 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 SEZ6LQ9BYH1 1024 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 C5AR2Q9P296 337 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 SLC45A2Q9UMX9 530 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 A0A1W2PQF6 199 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 EFCAB8A8MWE9 144 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 CYP26A1O43174 497 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 OR2C1O95371 312 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ITGB5P18084 799 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ADCY7P51828 1080 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ADAM17P78536 824 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 GRM4Q14833 912 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 CBWD5Q5RIA9 395 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 MCTP2Q6DN12 878 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 SLC23A3Q6PIS1 610 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 DENND5BQ6ZUT9 1274 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 DTX1Q86Y01 620 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 SVOPQ8N4V2 548 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 OSBPL1AQ9BXW6 950 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 MRPL9Q9BYD2 267 aaKnown RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 ABCF3Q9NUQ8 709 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ZFP69BQ9UJL9 534 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 LAMC3Q9Y6N6 1575 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ADM5C9JUS6 153 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 RRP9O43818 475 aaKnown RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 DHX16O60231 1041 aaKnown RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 TIPRLO75663 272 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 LARGE1O95461 756 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 SCG2P13521 617 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 GYS1P13807 737 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 KLRK1P26718 216 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ITGA1P56199 1179 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 NKX3-2P78367 333 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 DLX2Q07687 328 aaPredicted RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 ADAM15Q13444 863 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 TBRG1Q3YBR2 411 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 FAXCQ5TGI0 409 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 R3HCC1LQ7Z5L2 792 aaKnown RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 USP37Q86T82 979 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 APPL2Q8NEU8 664 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 AFG1LQ8WV93 481 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 UCMAQ8WVF2 138 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 LENG8Q96PV6 779 aaPredicted RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 PPP1R10Q96QC0 940 aaKnown RBP3.37□□□□□ -1.87
SMC4-203ENST00000462668 TAS2R10Q9NYW0 307 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 SLAMF8Q9P0V8 285 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 ATP11BQ9Y2G3 1177 aa3.37□□□□□ -1.87
SMC4-203ENST00000462668 NPIPB15A6NHN6 443 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 SH2B2O14492 632 aaPredicted RBP3.36□□□□□ -1.87
SMC4-203ENST00000462668 IFNAR1P17181 557 aa3.36□□□□□ -1.87
SMC4-203ENST00000462668 SPINK2P20155 84 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms