RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 NAPAP54920 295 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ERVFRD-1P60508 538 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 SMAD3P84022 425 aaKnown RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 MPP1Q00013 466 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 PRKG2Q13237 762 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 BLMHQ13867 455 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 TRIM29Q14134 588 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 SMAD2Q15796 467 aaKnown RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 KIZQ2M2Z5 673 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 USH1GQ495M9 461 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 CCDC38Q502W7 563 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 EARS2Q5JPH6 523 aaKnown RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 E4F1Q66K89 784 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 CLEC17AQ6ZS10 378 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 C16orf59Q7L2K0 433 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 IRF2BP1Q8IU81 584 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 DIS3L2Q8IYB7 885 aaKnown RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 PRR18Q8N4B5 295 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 REPS2Q8NFH8 660 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ZSCAN18Q8TBC5 510 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ARL8AQ96BM9 186 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 MMP19Q99542 508 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 BOCQ9BWV1 1114 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 APOL5Q9BWW9 433 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ZMYND12Q9H0C1 365 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ZNF552Q9H707 407 aaPredicted RBP5.16□□□□□ -1.58
CSMD3-205ENST00000462254 CERS4Q9HA82 394 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 TNFRSF12AQ9NP84 129 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 PADI4Q9UM07 663 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 ADAMTS5Q9UNA0 930 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 AGTPBP1Q9UPW5 1226 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 GPR45Q9Y5Y3 372 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 MYPNQ86TC9 1320 aa5.16□□□□□ -1.58
CSMD3-205ENST00000462254 TRBV23OR9-2A0A075B6M9 112 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CCL15-CCL14A0A0B4J2E2 113 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BICDL2A1A5D9 508 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 OR14I1A6ND48 311 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 SMCO2A6NFE2 343 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CAPN8A6NHC0 703 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 NUDT19A8MXV4 375 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BTBD19C9JJ37 291 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 VWA5AO00534 786 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 MEIS2O14770 477 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 MGEA5O60502 916 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 MSCO60682 206 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 PEX10O60683 326 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CNMDO75829 334 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BAIAP3O94812 1187 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BAG4O95429 457 aaKnown RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 ICAM1P05362 532 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 PYGLP06737 847 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 ZBTB48P10074 688 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 XBP1P17861 261 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 KRT2P35908 639 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 LTBRP36941 435 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 ARL4AP40617 200 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 PIK3CBP42338 1070 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 MTNR1BP49286 362 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 DNM2P50570 870 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 AGFG1P52594 562 aaKnown RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 NLRP5P59047 1200 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 FSTL1Q12841 308 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 SNAPC2Q13487 334 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 COG2Q14746 738 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 PDCD1Q15116 288 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CCL15Q16663 113 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 UBE2SQ16763 222 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 ANO6Q4KMQ2 910 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 MUM1L1Q5H9M0 696 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BICRALQ6AI39 1079 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 RGMBQ6NW40 437 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 FRMD7Q6ZUT3 714 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 SYDE1Q6ZW31 735 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 PDZD4Q76G19 769 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 NOSTRINQ8IVI9 506 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 COLGALT2Q8IYK4 626 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BLIDQ8IZY5 108 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 OR8H2Q8N162 312 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 FAM26EQ8N5C1 309 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 RCBTB1Q8NDN9 531 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CCDC148Q8NFR7 591 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 CCDC12Q8WUD4 166 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BRI3BPQ8WY22 251 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 LRTOMTQ8WZ04 291 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 TBC1D5Q92609 795 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 USP13Q92995 863 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 FBXW5Q969U6 566 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 KIAA1191Q96A73 305 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 TBC1D20Q96BZ9 403 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 ZBTB10Q96DT7 871 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 PGBD1Q96JS3 809 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 UBXN10Q96LJ8 280 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 USP28Q96RU2 1077 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 P2RX7Q99572 595 aaKnown RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 AMNQ9BXJ7 453 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 FTOQ9C0B1 505 aaKnown RBP eCLIP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 BTBD1Q9H0C5 482 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 EPB41L4BQ9H329 900 aa5.15□□□□□ -1.59
CSMD3-205ENST00000462254 FOXP1Q9H334 677 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-205ENST00000462254 ZSCAN16Q9H4T2 348 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms