RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 IQANK1A0A1B0GTG1 560 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 TCRBV9S1A1TA0A576 114 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 KBTBD13C9JR72 458 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 PSMA2P25787 234 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 RFC1P35251 1148 aaPredicted RBP19.29■□□□□ 0.68
HPS3-204ENST00000462030 PGM1P36871 562 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 ERFP50548 548 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 AP1ARQ63HQ0 302 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 BBS12Q6ZW61 710 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 APLFQ8IW19 511 aaPredicted RBP19.29■□□□□ 0.68
HPS3-204ENST00000462030 TMEM35BQ8NCS4 154 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 PPP1R12CQ9BZL4 782 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 MMADHCQ9H3L0 296 aaPredicted RBP19.29■□□□□ 0.68
HPS3-204ENST00000462030 STRIP2Q9ULQ0 834 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 SCAF8Q9UPN6 1271 aaKnown RBP19.29■□□□□ 0.68
HPS3-204ENST00000462030 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.29■□□□□ 0.68
HPS3-204ENST00000462030 LRCH4O75427 683 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 ASNSP08243 561 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 KCNA3P22001 575 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 SERPINB4P48594 390 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 SLC18A2Q05940 514 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 EMC2Q15006 297 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 CWF19L1Q69YN2 538 aaKnown RBP19.29■□□□□ 0.68
HPS3-204ENST00000462030 CDHR3Q6ZTQ4 885 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 KIAA0319LQ8IZA0 1049 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 JOSD2Q8TAC2 188 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 TFAP2BQ92481 460 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 FAM161BQ96MY7 647 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 FBXO40Q9UH90 709 aa19.29■□□□□ 0.68
HPS3-204ENST00000462030 LRRIQ4A6NIV6 560 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 WDR46O15213 610 aaKnown RBP19.28■□□□□ 0.68
HPS3-204ENST00000462030 FAM155BO75949 473 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 SNUPNO95149 360 aaKnown RBP19.28■□□□□ 0.68
HPS3-204ENST00000462030 LSM8O95777 96 aaKnown RBP19.28■□□□□ 0.68
HPS3-204ENST00000462030 KCNA2P16389 499 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 CHRNA5P30532 468 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 MDH1BQ5I0G3 518 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 POLNQ7Z5Q5 900 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 TREML1Q86YW5 311 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 SLC44A1Q8WWI5 657 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 MECRQ9BV79 373 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 H0YCG3 227 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 H3BRJ5 948 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 TBC1D12O60347 775 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 AP1G2O75843 785 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 INHBAP08476 426 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 KDELR1P24390 212 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 BIRC2Q13490 618 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 BAATQ14032 418 aaPredicted RBP19.28■□□□□ 0.68
HPS3-204ENST00000462030 HSF5Q4G112 596 aaPredicted RBP19.28■□□□□ 0.68
HPS3-204ENST00000462030 MAP3K20Q9NYL2 800 aaKnown RBP19.28■□□□□ 0.68
HPS3-204ENST00000462030 IKBKGQ9Y6K9 419 aa19.28■□□□□ 0.68
HPS3-204ENST00000462030 ENO1P06733 434 aaKnown RBP19.27■□□□□ 0.68
HPS3-204ENST00000462030 PSAPP07602 524 aa19.27■□□□□ 0.68
HPS3-204ENST00000462030 CACNA2D1P54289 1103 aa19.27■□□□□ 0.68
HPS3-204ENST00000462030 ZNF200P98182 395 aaPredicted RBP19.27■□□□□ 0.68
HPS3-204ENST00000462030 PPFIBP2Q8ND30 876 aa19.27■□□□□ 0.68
HPS3-204ENST00000462030 IMPG2Q9BZV3 1241 aa19.27■□□□□ 0.68
HPS3-204ENST00000462030 SLC9A2Q9UBY0 812 aa19.27■□□□□ 0.68
HPS3-204ENST00000462030 ZNF212Q9UDV6 495 aa19.27■□□□□ 0.68
HPS3-204ENST00000462030 ZBTB12Q9Y330 459 aaPredicted RBP19.27■□□□□ 0.68
HPS3-204ENST00000462030 B2RBV5 119 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 MAP3K7O43318 606 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 STAM2O75886 525 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 RGS20O76081 388 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 ASS1P00966 412 aaKnown RBP19.27■□□□□ 0.67
HPS3-204ENST00000462030 NR3C2P08235 984 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 YWHAGP61981 247 aaKnown RBP eCLIP19.27■□□□□ 0.67
HPS3-204ENST00000462030 TAP1Q03518 808 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 TAF5Q15542 800 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 PRPF39Q86UA1 669 aaKnown RBP19.27■□□□□ 0.67
HPS3-204ENST00000462030 VSIG10LQ86VR7 867 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 GATA6Q92908 595 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 WNK4Q96J92 1243 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 CISHQ9NSE2 258 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 WDR35Q9P2L0 1181 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 RIPK3Q9Y572 518 aa19.27■□□□□ 0.67
HPS3-204ENST00000462030 A0A0B4J269 797 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 K7ERI5 159 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 SMAPO00193 183 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 AVILO75366 819 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 RAD17O75943 681 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 TNFSF9P41273 254 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 RAB27AP51159 221 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 EIF3EP60228 445 aaKnown RBP19.26■□□□□ 0.67
HPS3-204ENST00000462030 MYL6P60660 151 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 ROR2Q01974 943 aaKnown RBP19.26■□□□□ 0.67
HPS3-204ENST00000462030 DPYSL3Q14195 570 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 PTPN20Q4JDL3 420 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 CES4AQ5XG92 561 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 SCARA5Q6ZMJ2 495 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 RFX6Q8HWS3 928 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 GALNT15Q8N3T1 639 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 EMC1Q8N766 993 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 TTC13Q8NBP0 860 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 GPRASP2Q96D09 838 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 CLPTM1LQ96KA5 538 aa19.26■□□□□ 0.67
HPS3-204ENST00000462030 SRPK1Q96SB4 655 aaKnown RBP19.26■□□□□ 0.67
HPS3-204ENST00000462030 ZNF184Q99676 751 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms