RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 UNGP13051 313 aaPredicted RBP16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 TNNT1P13805 278 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 COL9A1P20849 921 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 NOP2P46087 812 aaKnown RBP16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 GPC5P78333 572 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 CENPCQ03188 943 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 OVOS1Q6IE37 1185 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 LLGL2Q6P1M3 1020 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 LCLAT1Q6UWP7 414 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 NYAP1Q6ZVC0 841 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 OLIG1Q8TAK6 271 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 CPA5Q8WXQ8 436 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 CALR3Q96L12 384 aaKnown RBP16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 KLHL5Q96PQ7 755 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 ALS2CR12Q96Q35 445 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 EMILIN2Q9BXX0 1053 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 PACSIN1Q9BY11 444 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 DZANK1Q9NVP4 752 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 TAS2R14Q9NYV8 317 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 ADAM28Q9UKQ2 775 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 CDH9Q9ULB4 789 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 TFR2Q9UP52 801 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 TIMM13Q9Y5L4 95 aaPredicted RBP16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 SF3B1O75533 1304 aaKnown RBP eCLIP16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 A0A0A6YYK5 440 aaPredicted RBP16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 M0QYV0 167 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 SYN3O14994 580 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 MICAL2O94851 1124 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 C1RP00736 705 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 CALB1P05937 261 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 PTPN1P18031 435 aaKnown RBP16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 LMO2P25791 158 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 SLC8A3P57103 927 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 SNX16P57768 344 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 ETF1P62495 437 aaKnown RBP16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 NOMO3P69849 1222 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 YWHAHQ04917 246 aaPredicted RBP16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 GOLGA7BQ2TAP0 167 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 ARHGAP17Q68EM7 881 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 DENND1BQ6P3S1 775 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 OSTM1Q86WC4 334 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 PHF13Q86YI8 300 aaPredicted RBP16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 RNF135Q8IUD6 432 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 RHOT2Q8IXI1 618 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 B3GALNT2Q8NCR0 500 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 AUTS2Q8WXX7 1259 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 ZNF653Q96CK0 615 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 NECTIN4Q96NY8 510 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 SYT15Q9BQS2 421 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 HERC2P3Q9BVR0 1158 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 MIS12Q9H081 205 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 SYNCQ9H7C4 482 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 CHST7Q9NS84 486 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 ADAM22Q9P0K1 906 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 TSPAN16Q9UKR8 245 aa16.05■□□□□ 0.16
TMEM39A-203ENST00000461654 SCN1AP35498 2009 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 A0A0U1RQJ8 604 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 PRR33A8MZF0 331 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 CNPP09543 421 aaKnown RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 SETSIPP0DME0 302 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 IGFBP6P24592 240 aaPredicted RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 CDH5P33151 784 aaPredicted RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 TSPY1Q01534 308 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 MAPRE1Q15691 268 aaKnown RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 KIAA0319Q5VV43 1072 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 ERICH1Q86X53 443 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 MCOLN2Q8IZK6 566 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 C12orf29Q8N999 325 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 C1orf131Q8NDD1 294 aaKnown RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 RFFLQ8WZ73 363 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 ZSWIM1Q9BR11 485 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 ACBD6Q9BR61 282 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 MED10Q9BTT4 135 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 THAP2Q9H0W7 228 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 DPEP3Q9H4B8 488 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 RXFP1Q9HBX9 757 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 CTTNBP2NLQ9P2B4 639 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 GTF3C4Q9UKN8 822 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 STRIP2Q9ULQ0 834 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 ARIH1Q9Y4X5 557 aaPredicted RBP16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 PAXBP1Q9Y5B6 917 aa16.04■□□□□ 0.16
TMEM39A-203ENST00000461654 URODP06132 367 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 CFHP08603 1231 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 ADORA2BP29275 332 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 CASQ1P31415 396 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 CA8P35219 290 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms