RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 SLC8A3P57103 927 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 CDR2Q01850 454 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 ARID5AQ03989 594 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 KLHL30Q0D2K2 578 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 CNGA2Q16280 664 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 CTC1Q2NKJ3 1217 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 GOLGA7BQ2TAP0 167 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 TDRD12Q587J7 1177 aaKnown RBP15.25■□□□□ 0.03
COL5A3-202ENST00000461214 PPP1R26Q5T8A7 1209 aaPredicted RBP15.25■□□□□ 0.03
COL5A3-202ENST00000461214 TRIM72Q6ZMU5 477 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 RNF19BQ6ZMZ0 732 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 NOP9Q86U38 636 aaKnown RBP15.25■□□□□ 0.03
COL5A3-202ENST00000461214 VPS36Q86VN1 386 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 C12orf29Q8N999 325 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 SLC2A14Q8TDB8 520 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 HDAC7Q8WUI4 952 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 ZNF606Q8WXB4 792 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 TFAP2BQ92481 460 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 DDX1Q92499 740 aaKnown RBP15.25■□□□□ 0.03
COL5A3-202ENST00000461214 B3GNT5Q9BYG0 378 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 PNPLA8Q9NP80 782 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 KRT82Q9NSB4 513 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 TMLHEQ9NVH6 421 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 ABI2Q9NYB9 513 aaPredicted RBP15.25■□□□□ 0.03
COL5A3-202ENST00000461214 TSPAN16Q9UKR8 245 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 CEP83Q9Y592 693 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 NOTCH4Q99466 2003 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 DOCK6Q96HP0 2047 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 SSU72P8A0A1W2PR75 194 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 M0QYV0 167 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 TRIM66O15016 1216 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 FAM200BP0CF97 657 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 NPR3P17342 541 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 KLRC2P26717 231 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 ARPP19P56211 112 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 BST2Q10589 180 aaKnown RBP15.24■□□□□ 0.03
COL5A3-202ENST00000461214 DUSP6Q16828 381 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 CCDC142Q17RM4 750 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 HGSNATQ68CP4 663 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 PPP1R2P3Q6NXS1 205 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 LILRA6Q6PI73 481 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 CCDC149Q6ZUS6 474 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 GLYCTKQ8IVS8 523 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 TCEAL8Q8IYN2 117 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 ANKRD52Q8NB46 1076 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 ZSWIM1Q9BR11 485 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 SYT11Q9BT88 431 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 MED10Q9BTT4 135 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 LHX5Q9H2C1 402 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 PLEKHA4Q9H4M7 779 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 CSNK1G1Q9HCP0 422 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 DMAP1Q9NPF5 467 aaPredicted RBP15.24■□□□□ 0.03
COL5A3-202ENST00000461214 PCDHGC5Q9Y5F6 944 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 C5orf42Q9H799 3197 aa15.24■□□□□ 0.03
COL5A3-202ENST00000461214 TGM5O43548 720 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 CLASP2O75122 1294 aaKnown RBP15.23■□□□□ 0.03
COL5A3-202ENST00000461214 VNN2O95498 520 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 SRGAP2BP0DMP2 458 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 ADORA2BP29275 332 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 CDH5P33151 784 aaPredicted RBP15.23■□□□□ 0.03
COL5A3-202ENST00000461214 TUFMP49411 452 aaKnown RBP15.23■□□□□ 0.03
COL5A3-202ENST00000461214 ADCY1Q08828 1119 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 SIGLEC14Q08ET2 396 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
COL5A3-202ENST00000461214 PLD1Q13393 1074 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 WDR59Q6PJI9 974 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 PAQR9Q6ZVX9 377 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 ADGRD2Q7Z7M1 963 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 CCDC112Q8NEF3 446 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 SLC20A1Q8WUM9 679 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 PGLYRP2Q96PD5 576 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 DUSP16Q9BY84 665 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 ZNF518BQ9C0D4 1074 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 HAUS4Q9H6D7 363 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 TLE6Q9H808 572 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 ACP6Q9NPH0 428 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 PTPRZ1P23471 2315 aaPredicted RBP15.23■□□□□ 0.03
COL5A3-202ENST00000461214 TRIOO75962 3097 aa15.23■□□□□ 0.03
COL5A3-202ENST00000461214 PRR23AA6NEV1 266 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 XPO1O14980 1071 aaKnown RBP15.22■□□□□ 0.03
COL5A3-202ENST00000461214 AP1G2O75843 785 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 MICAL2O94851 1124 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 HAPLN1P10915 354 aaPredicted RBP15.22■□□□□ 0.03
COL5A3-202ENST00000461214 BDNFP23560 247 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 HOXA9P31269 272 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 ELF1P32519 619 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 RPL10AP62906 217 aaKnown RBP15.22■□□□□ 0.03
COL5A3-202ENST00000461214 FMO1Q01740 532 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 LIN9Q5TKA1 542 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 CLEC20AQ6ZU45 233 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 SLC22A17Q8WUG5 538 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 RPGRIP1Q96KN7 1286 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 C8orf48Q96LL4 319 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 AGPAT1Q99943 283 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 LPIN3Q9BQK8 851 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 CYLDQ9NQC7 956 aa15.22■□□□□ 0.03
COL5A3-202ENST00000461214 DZANK1Q9NVP4 752 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms