RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FSCN3Q9NQT6 498 aa18.48■□□□□ 0.55
TOP3A-202ENST00000461127 SMG1Q96Q15 3661 aaKnown RBP18.48■□□□□ 0.55
TOP3A-202ENST00000461127 TCRBV21S2A2A0A5A6 115 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 C2orf78A6NCI8 922 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 K7ENM7 598 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 SGK1O00141 431 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 ARHGAP33O14559 1287 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 EIF2DP41214 584 aaKnown RBP18.47■□□□□ 0.55
TOP3A-202ENST00000461127 PRPHP41219 470 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 PNPLA4P41247 253 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 MYL7Q01449 175 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 SLC14A1Q13336 389 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 ADAMTS14Q8WXS8 1223 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 ACBD6Q9BR61 282 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 MMTAG2Q9BU76 263 aaKnown RBP18.47■□□□□ 0.55
TOP3A-202ENST00000461127 ODF2LQ9ULJ1 636 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 ANAPC1Q9H1A4 1944 aa18.47■□□□□ 0.55
TOP3A-202ENST00000461127 APC2O95996 2303 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 SLC9A3R1O14745 358 aaPredicted RBP18.46■□□□□ 0.55
TOP3A-202ENST00000461127 KAT7O95251 611 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 CYP17A1P05093 508 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 PLA2G4BP0C869 781 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 CD59P13987 128 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 PFKLP17858 780 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 ABCD1P33897 745 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 ACOT2P49753 483 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 SLC12A3P55017 1021 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 RESTQ13127 1097 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 SPATA2LQ8IUW3 424 aaPredicted RBP18.46■□□□□ 0.55
TOP3A-202ENST00000461127 CCDC83Q8IWF9 413 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 SCN4BQ8IWT1 228 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 KIAA1958Q8N8K9 716 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 FBXO18Q8NFZ0 1043 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 LRRC15Q8TF66 581 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 DNAAF2Q9NVR5 837 aaKnown RBP18.46■□□□□ 0.55
TOP3A-202ENST00000461127 DDX43Q9NXZ2 648 aaKnown RBP18.46■□□□□ 0.55
TOP3A-202ENST00000461127 APOBEC2Q9Y235 224 aaKnown RBP18.46■□□□□ 0.55
TOP3A-202ENST00000461127 CEP192Q8TEP8 1941 aa18.46■□□□□ 0.55
TOP3A-202ENST00000461127 HELZP42694 1942 aaKnown RBP18.45■□□□□ 0.54
TOP3A-202ENST00000461127 HELZ2Q9BYK8 2649 aaKnown RBP18.45■□□□□ 0.54
TOP3A-202ENST00000461127 NPHP3-ACAD11A0A0J9YXS1 232 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 ANTXRLA6NF34 631 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.45■□□□□ 0.54
TOP3A-202ENST00000461127 ZBTB24O43167 697 aaPredicted RBP18.45■□□□□ 0.54
TOP3A-202ENST00000461127 HUS1O60921 280 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 FTH1P19P0C7X4 201 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 GRIA2P42262 883 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 ZNF33AQ06730 810 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 CUL4AQ13619 759 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 GAB4Q2WGN9 574 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 INTS6LQ5JSJ4 861 aaKnown RBP18.45■□□□□ 0.54
TOP3A-202ENST00000461127 HYIQ5T013 277 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 ADALQ6DHV7 355 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 SLFN12LQ6IEE8 588 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 CCNI2Q6ZMN8 369 aaPredicted RBP18.45■□□□□ 0.54
TOP3A-202ENST00000461127 TMEM86AQ8N2M4 240 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 MYCT1Q8N699 235 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 SPRYD3Q8NCJ5 442 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 HNRNPLLQ8WVV9 542 aaKnown RBP18.45■□□□□ 0.54
TOP3A-202ENST00000461127 ARHGEF4Q9NR80 690 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 PCDHB6Q9Y5E3 794 aa18.45■□□□□ 0.54
TOP3A-202ENST00000461127 LEFTY2O00292 366 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 SH3BP5O60239 455 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 FAM13AO94988 1023 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 ADH1CP00326 375 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 TNFRSF4P43489 277 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 POU5F1Q01860 360 aaKnown RBP18.44■□□□□ 0.54
TOP3A-202ENST00000461127 DHCR24Q15392 516 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 TRMT11Q7Z4G4 463 aaKnown RBP18.44■□□□□ 0.54
TOP3A-202ENST00000461127 FILIP1Q7Z7B0 1213 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 NT5DC4Q86YG4 428 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 DEFB119Q8N690 84 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 GLIS3Q8NEA6 775 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 FUBP3Q96I24 572 aaKnown RBP eCLIP18.44■□□□□ 0.54
TOP3A-202ENST00000461127 LRIG1Q96JA1 1093 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 PLIN2Q99541 437 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 PARVGQ9HBI0 331 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 SCUBE2Q9NQ36 999 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 TRPM5Q9NZQ8 1165 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 GTF3C4Q9UKN8 822 aa18.44■□□□□ 0.54
TOP3A-202ENST00000461127 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
TOP3A-202ENST00000461127 MYO18AQ92614 2054 aaKnown RBP18.44■□□□□ 0.54
TOP3A-202ENST00000461127 PCDH15Q96QU1 1955 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 A0A1W2PQD8 194 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 ADAM23O75077 832 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 IL18RAPO95256 599 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 ACAT1P24752 427 aaKnown RBP18.43■□□□□ 0.54
TOP3A-202ENST00000461127 PCSK1P29120 753 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 KIR2DL1P43626 348 aaPredicted RBP18.43■□□□□ 0.54
TOP3A-202ENST00000461127 SLC6A11P48066 632 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 ATP2C1P98194 919 aaPredicted RBP18.43■□□□□ 0.54
TOP3A-202ENST00000461127 IL17AQ16552 155 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 PREPLQ4J6C6 727 aaPredicted RBP18.43■□□□□ 0.54
TOP3A-202ENST00000461127 EMC10Q5UCC4 262 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 SLC39A4Q6P5W5 647 aa18.43■□□□□ 0.54
TOP3A-202ENST00000461127 OR2I1PQ8NGU4 316 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms