RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 MYCBPQ99417 103 aaPredicted RBP11.75□□□□□ -0.53
APTX-209ENST00000460940 CORO1BQ9BR76 489 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 ZNF518BQ9C0D4 1074 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 DMAP1Q9NPF5 467 aaPredicted RBP11.75□□□□□ -0.53
APTX-209ENST00000460940 ST7Q9NRC1 585 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 HCFC1R1Q9NWW0 138 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 EHD2Q9NZN4 543 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 KIAA1257Q9ULG3 409 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 CUL9Q8IWT3 2517 aa11.75□□□□□ -0.53
APTX-209ENST00000460940 NOL4O94818 638 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 PAEPP09466 180 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 PNMA6AP0CW24 399 aaPredicted RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 SLC9A1P19634 815 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 ACO1P21399 889 aaKnown RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 RAD23BP54727 409 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 GPS2Q13227 327 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 ORC1Q13415 861 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 TAF12Q16514 161 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 DNAJB7Q7Z6W7 309 aaPredicted RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 TMC8Q8IU68 726 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 SCN4BQ8IWT1 228 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 FUKQ8N0W3 1084 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 SLC4A11Q8NBS3 891 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 SLC2A14Q8TDB8 520 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 TRMT2BQ96GJ1 504 aaKnown RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 HNRNPABQ99729 332 aaKnown RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 NCAPGQ9BPX3 1015 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 LPIN3Q9BQK8 851 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 CBX8Q9HC52 389 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 UBE2TQ9NPD8 197 aaPredicted RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 KRT82Q9NSB4 513 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 UXTQ9UBK9 157 aaPredicted RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 MRPS23Q9Y3D9 190 aaKnown RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 DAAM1Q9Y4D1 1078 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 PTPRDP23468 1912 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 TUBB4AP04350 444 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 FAM200BP0CF97 657 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 CCDC130P13994 396 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 GRIK1P39086 918 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 NTHL1P78549 312 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 DDR2Q16832 855 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 PRSS36Q5K4E3 855 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 ARHGAP17Q68EM7 881 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 GET4Q7L5D6 327 aaPredicted RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 ZDHHC14Q8IZN3 488 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 C12orf29Q8N999 325 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 KAT5Q92993 513 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 CYFIP2Q96F07 1278 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 RPGRIP1Q96KN7 1286 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 HEXIM2Q96MH2 286 aaKnown RBP11.74□□□□□ -0.53
APTX-209ENST00000460940 KREMEN1Q96MU8 473 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 GCNAQ96QF7 691 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 UBXN6Q9BZV1 441 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 VPS16Q9H269 839 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 L2HGDHQ9H9P8 463 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 SIX2Q9NPC8 291 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 FAM49BQ9NUQ9 324 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 EPS15L1Q9UBC2 864 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 CDH7Q9ULB5 785 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 CNTN6Q9UQ52 1028 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 PCDHB4Q9Y5E5 795 aa11.74□□□□□ -0.53
APTX-209ENST00000460940 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 C2CD4DB7Z1M9 353 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 F8VP50 259 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 GOLGA6L19H0YKK7 550 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 MYO1CO00159 1063 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 CLDN5O00501 218 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 AP1G2O75843 785 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 ATP1A3P13637 1013 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 KCNA4P22459 653 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 CDC25CP30307 473 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 PLA2G4AP47712 749 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 GPR15P49685 360 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 CDR1P51861 262 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 ZNF132P52740 706 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 ZNF394Q53GI3 561 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 SGO2Q562F6 1265 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 TMEM270Q6UE05 265 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 PAQR9Q6ZVX9 377 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 APTXQ7Z2E3 356 aaKnown RBP11.73□□□□□ -0.53
APTX-209ENST00000460940 GOLGA6L1Q8N7Z2 621 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
APTX-209ENST00000460940 GIPC2Q8TF65 315 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 MYRFLQ96LU7 910 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 PNPLA8Q9NP80 782 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 PLCB1Q9NQ66 1216 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 PSD3Q9NYI0 1048 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 GDE1Q9NZC3 331 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 ZMYM5Q9UJ78 669 aa11.73□□□□□ -0.53
APTX-209ENST00000460940 ZRANB2O95218 330 aaKnown RBP eCLIP11.72□□□□□ -0.53
APTX-209ENST00000460940 VDRP11473 427 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 MYL4P12829 197 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 HMGA1P17096 107 aaKnown RBP11.72□□□□□ -0.53
APTX-209ENST00000460940 GBP2P32456 591 aaPredicted RBP11.72□□□□□ -0.53
APTX-209ENST00000460940 STILQ15468 1287 aa11.72□□□□□ -0.53
APTX-209ENST00000460940 SLC5A9Q2M3M2 681 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms